Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AL161651.1-201ENST00000440882 223 ntBASIC2.54□□□□□ -2
CDH3P22223 HMGN2P26-201ENST00000463169 339 ntBASIC2.54□□□□□ -2
CDH3P22223 AC091885.1-201ENST00000506658 268 ntBASIC2.54□□□□□ -2
CDH3P22223 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.54□□□□□ -2
CDH3P22223 Y_RNA.687-201ENST00000516558 91 ntBASIC2.54□□□□□ -2
CDH3P22223 BTF3P12-201ENST00000519620 469 ntBASIC2.54□□□□□ -2
CDH3P22223 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.54□□□□□ -2
CDH3P22223 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.54□□□□□ -2
CDH3P22223 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.54□□□□□ -2
CDH3P22223 MIR4513-201ENST00000581077 86 ntBASIC2.54□□□□□ -2
CDH3P22223 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.54□□□□□ -2
CDH3P22223 VN1R80P-201ENST00000597126 338 ntBASIC2.54□□□□□ -2
CDH3P22223 AP000907.4-201ENST00000604143 237 ntBASIC2.54□□□□□ -2
CDH3P22223 AC091152.3-201ENST00000604227 325 ntBASIC2.54□□□□□ -2
CDH3P22223 AC104458.1-201ENST00000608243 463 ntBASIC2.54□□□□□ -2
CDH3P22223 AC092807.2-201ENST00000609367 243 ntBASIC2.54□□□□□ -2
CDH3P22223 AC068944.2-201ENST00000610373 403 ntBASIC2.54□□□□□ -2
CDH3P22223 U2.17-201ENST00000611454 95 ntBASIC2.54□□□□□ -2
CDH3P22223 AL137847.3-201ENST00000611521 109 ntBASIC2.54□□□□□ -2
CDH3P22223 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.54□□□□□ -2
CDH3P22223 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.54□□□□□ -2
CDH3P22223 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CDH3P22223 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
CDH3P22223 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.54□□□□□ -2
CDH3P22223 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CDH3P22223 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDH3P22223 SNORA38-201ENST00000363946 132 ntBASIC2.53□□□□□ -2
CDH3P22223 RNU6-82P-201ENST00000363970 107 ntBASIC2.53□□□□□ -2
CDH3P22223 RNU6-266P-201ENST00000364225 107 ntBASIC2.53□□□□□ -2
CDH3P22223 Y_RNA.248-201ENST00000364501 109 ntBASIC2.53□□□□□ -2
CDH3P22223 Y_RNA.324-201ENST00000365165 102 ntBASIC2.53□□□□□ -2
CDH3P22223 RNU6-877P-201ENST00000383868 107 ntBASIC2.53□□□□□ -2
CDH3P22223 Y_RNA.573-201ENST00000384763 105 ntBASIC2.53□□□□□ -2
CDH3P22223 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.53□□□□□ -2
CDH3P22223 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.53□□□□□ -2
CDH3P22223 RNA5SP219-201ENST00000390940 113 ntBASIC2.53□□□□□ -2
CDH3P22223 U3.37-201ENST00000408528 213 ntBASIC2.53□□□□□ -2
CDH3P22223 POLHP1-201ENST00000411806 470 ntBASIC2.53□□□□□ -2
CDH3P22223 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.53□□□□□ -2
CDH3P22223 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.53□□□□□ -2
CDH3P22223 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.53□□□□□ -2
CDH3P22223 ERLEC1P1-201ENST00000433806 578 ntBASIC2.53□□□□□ -2
CDH3P22223 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.53□□□□□ -2
CDH3P22223 AL139109.1-201ENST00000455491 297 ntBASIC2.53□□□□□ -2
CDH3P22223 RNU6-1208P-201ENST00000459588 107 ntBASIC2.53□□□□□ -2
CDH3P22223 AC133134.1-201ENST00000466800 359 ntBASIC2.53□□□□□ -2
CDH3P22223 AC069439.1-201ENST00000494739 167 ntBASIC2.53□□□□□ -2
CDH3P22223 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.53□□□□□ -2
CDH3P22223 AC116655.1-201ENST00000508324 901 ntBASIC2.53□□□□□ -2
CDH3P22223 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.53□□□□□ -2
CDH3P22223 AC114781.4-201ENST00000513707 639 ntBASIC2.53□□□□□ -2
CDH3P22223 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
CDH3P22223 SNORD19.2-201ENST00000516978 73 ntBASIC2.53□□□□□ -2
CDH3P22223 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.53□□□□□ -2
CDH3P22223 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.53□□□□□ -2
CDH3P22223 SNORA59B-202ENST00000578183 701 ntBASIC2.53□□□□□ -2
CDH3P22223 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.53□□□□□ -2
CDH3P22223 AL391813.1-201ENST00000603098 260 ntBASIC2.53□□□□□ -2
CDH3P22223 AC092747.3-201ENST00000603769 301 ntBASIC2.53□□□□□ -2
CDH3P22223 MIR203B-201ENST00000636080 86 ntBASIC2.53□□□□□ -2
CDH3P22223 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDH3P22223 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CDH3P22223 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH3P22223 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
CDH3P22223 RNU6-942P-201ENST00000363002 107 ntBASIC2.52□□□□□ -2.01
CDH3P22223 Y_RNA.480-201ENST00000384364 102 ntBASIC2.52□□□□□ -2.01
CDH3P22223 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH3P22223 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH3P22223 RPLP0P7-201ENST00000416050 667 ntBASIC2.52□□□□□ -2.01
CDH3P22223 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH3P22223 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH3P22223 CALM1P1-201ENST00000442082 433 ntBASIC2.52□□□□□ -2.01
CDH3P22223 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH3P22223 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH3P22223 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.52□□□□□ -2.01
CDH3P22223 Y_RNA.654-201ENST00000497848 106 ntBASIC2.52□□□□□ -2.01
CDH3P22223 HMGB3P3-201ENST00000510526 400 ntBASIC2.52□□□□□ -2.01
CDH3P22223 RPL23AP94-201ENST00000512518 302 ntBASIC2.52□□□□□ -2.01
CDH3P22223 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH3P22223 RNU6-189P-201ENST00000516120 101 ntBASIC2.52□□□□□ -2.01
CDH3P22223 Y_RNA.665-201ENST00000516177 98 ntBASIC2.52□□□□□ -2.01
CDH3P22223 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
CDH3P22223 BNIP3P25-201ENST00000596023 559 ntBASIC2.52□□□□□ -2.01
CDH3P22223 AC123912.5-201ENST00000605470 343 ntBASIC2.52□□□□□ -2.01
CDH3P22223 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CDH3P22223 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.52□□□□□ -2.01
CDH3P22223 AC245884.12-201ENST00000615364 59 ntBASIC2.52□□□□□ -2.01
CDH3P22223 AC002553.4-201ENST00000616896 331 ntBASIC2.52□□□□□ -2.01
CDH3P22223 AC103705.1-201ENST00000619013 241 ntBASIC2.52□□□□□ -2.01
CDH3P22223 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH3P22223 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.52□□□□□ -2.01
CDH3P22223 Z69720.2-201ENST00000624755 279 ntBASIC2.52□□□□□ -2.01
CDH3P22223 MIR3662-201ENST00000637030 95 ntBASIC2.52□□□□□ -2.01
CDH3P22223 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CDH3P22223 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.52□□□□□ -2.01
CDH3P22223 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CDH3P22223 AC010329.5-201ENST00000623497 2174 ntBASIC2.51□□□□□ -2.01
CDH3P22223 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.51□□□□□ -2.01
CDH3P22223 U3.12-201ENST00000364498 214 ntBASIC2.51□□□□□ -2.01
CDH3P22223 RNU6-1280P-201ENST00000365211 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms