Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 Y_RNA.135-201ENST00000363439 95 ntBASIC2.82□□□□□ -1.96
PCNAP12004 RNU1-105P-201ENST00000363470 161 ntBASIC2.82□□□□□ -1.96
PCNAP12004 RNU6-1329P-201ENST00000365664 107 ntBASIC2.82□□□□□ -1.96
PCNAP12004 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
PCNAP12004 RN7SKP32-201ENST00000410167 303 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AL117339.3-201ENST00000418733 162 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.82□□□□□ -1.96
PCNAP12004 SUMO1P4-201ENST00000429430 302 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.82□□□□□ -1.96
PCNAP12004 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.82□□□□□ -1.96
PCNAP12004 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.82□□□□□ -1.96
PCNAP12004 NIPA2P5-201ENST00000452282 464 ntBASIC2.82□□□□□ -1.96
PCNAP12004 MTND4P17-201ENST00000470444 350 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AC079140.5-201ENST00000507882 310 ntBASIC2.82□□□□□ -1.96
PCNAP12004 SLC25A15P5-201ENST00000508033 253 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AC113155.1-201ENST00000511141 769 ntBASIC2.82□□□□□ -1.96
PCNAP12004 SCGB1D5P-201ENST00000515134 247 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AP005639.2-201ENST00000527592 928 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AP002404.1-201ENST00000532005 451 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AC023043.2-201ENST00000589678 1026 ntBASIC2.82□□□□□ -1.96
PCNAP12004 AL162274.2-201ENST00000614406 332 ntBASIC2.82□□□□□ -1.96
PCNAP12004 uc_338.15-201ENST00000615470 191 ntBASIC2.82□□□□□ -1.96
PCNAP12004 MIR3651-201ENST00000630427 90 ntBASIC2.82□□□□□ -1.96
PCNAP12004 U4.7-201ENST00000638126 106 ntBASIC2.82□□□□□ -1.96
PCNAP12004 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCNAP12004 AC004944.1-201ENST00000517807 3059 ntBASIC2.82□□□□□ -1.96
PCNAP12004 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PCNAP12004 AC000403.1-201ENST00000613696 3585 ntBASIC2.81□□□□□ -1.96
PCNAP12004 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
PCNAP12004 Y_RNA.166-201ENST00000363730 102 ntBASIC2.81□□□□□ -1.96
PCNAP12004 SNORA9.2-201ENST00000365361 133 ntBASIC2.81□□□□□ -1.96
PCNAP12004 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCNAP12004 SNORD116-11-201ENST00000383882 92 ntBASIC2.81□□□□□ -1.96
PCNAP12004 AL138885.1-201ENST00000405921 675 ntBASIC2.81□□□□□ -1.96
PCNAP12004 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCNAP12004 RNU6-1140P-201ENST00000410517 106 ntBASIC2.81□□□□□ -1.96
PCNAP12004 AL451074.5-201ENST00000415894 435 ntBASIC2.81□□□□□ -1.96
PCNAP12004 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.81□□□□□ -1.96
PCNAP12004 AC004383.1-201ENST00000438135 289 ntBASIC2.81□□□□□ -1.96
PCNAP12004 HMGB1P18-201ENST00000438801 619 ntBASIC2.81□□□□□ -1.96
PCNAP12004 SNRPEP8-201ENST00000442866 260 ntBASIC2.81□□□□□ -1.96
PCNAP12004 AMD1P1-201ENST00000457220 922 ntBASIC2.81□□□□□ -1.96
PCNAP12004 MED28P2-201ENST00000475771 317 ntBASIC2.81□□□□□ -1.96
PCNAP12004 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.81□□□□□ -1.96
PCNAP12004 MTCYBP40-201ENST00000509390 1135 ntBASIC2.81□□□□□ -1.96
PCNAP12004 RNA5SP341-201ENST00000516261 117 ntBASIC2.81□□□□□ -1.96
PCNAP12004 RNU6-566P-201ENST00000516790 107 ntBASIC2.81□□□□□ -1.96
PCNAP12004 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.81□□□□□ -1.96
PCNAP12004 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCNAP12004 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.81□□□□□ -1.96
PCNAP12004 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.81□□□□□ -1.96
PCNAP12004 AC026371.1-201ENST00000551867 419 ntBASIC2.81□□□□□ -1.96
PCNAP12004 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.81□□□□□ -1.96
PCNAP12004 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.81□□□□□ -1.96
PCNAP12004 AC005668.1-201ENST00000571142 476 ntBASIC2.81□□□□□ -1.96
PCNAP12004 MIR4446-201ENST00000578505 67 ntBASIC2.81□□□□□ -1.96
PCNAP12004 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.81□□□□□ -1.96
PCNAP12004 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCNAP12004 AC008739.2-201ENST00000597006 317 ntBASIC2.81□□□□□ -1.96
PCNAP12004 ATP5A1P2-202ENST00000616464 443 ntBASIC2.81□□□□□ -1.96
PCNAP12004 AL008636.1-201ENST00000625038 1018 ntBASIC2.81□□□□□ -1.96
PCNAP12004 TPTEP1-208ENST00000636884 213 ntBASIC2.81□□□□□ -1.96
PCNAP12004 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
PCNAP12004 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.8□□□□□ -1.96
PCNAP12004 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCNAP12004 RPL9P7-201ENST00000330965 580 ntBASIC2.8□□□□□ -1.96
PCNAP12004 RNU6-562P-201ENST00000362731 107 ntBASIC2.8□□□□□ -1.96
PCNAP12004 Y_RNA.142-201ENST00000363491 102 ntBASIC2.8□□□□□ -1.96
PCNAP12004 RNU6-336P-201ENST00000364891 107 ntBASIC2.8□□□□□ -1.96
PCNAP12004 RNU6-214P-201ENST00000384130 107 ntBASIC2.8□□□□□ -1.96
PCNAP12004 RNU6-1013P-201ENST00000384180 107 ntBASIC2.8□□□□□ -1.96
PCNAP12004 RNU6-95P-201ENST00000384697 107 ntBASIC2.8□□□□□ -1.96
PCNAP12004 RNU6-19P-201ENST00000384718 107 ntBASIC2.8□□□□□ -1.96
PCNAP12004 AL139095.1-201ENST00000404326 391 ntBASIC2.8□□□□□ -1.96
PCNAP12004 MIR548F5-201ENST00000408421 86 ntBASIC2.8□□□□□ -1.96
PCNAP12004 AC022028.1-201ENST00000412054 408 ntBASIC2.8□□□□□ -1.96
PCNAP12004 PTGES3P4-201ENST00000426243 356 ntBASIC2.8□□□□□ -1.96
PCNAP12004 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.8□□□□□ -1.96
PCNAP12004 AC092427.1-202ENST00000430569 476 ntBASIC2.8□□□□□ -1.96
PCNAP12004 AL365400.1-201ENST00000431854 640 ntBASIC2.8□□□□□ -1.96
PCNAP12004 MTND1P11-201ENST00000456661 876 ntBASIC2.8□□□□□ -1.96
PCNAP12004 RNU7-187P-201ENST00000458985 68 ntBASIC2.8□□□□□ -1.96
PCNAP12004 AK3P2-201ENST00000507976 429 ntBASIC2.8□□□□□ -1.96
PCNAP12004 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.8□□□□□ -1.96
PCNAP12004 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.8□□□□□ -1.96
PCNAP12004 RNU6-377P-201ENST00000515965 102 ntBASIC2.8□□□□□ -1.96
PCNAP12004 RNA5SP454-201ENST00000517231 127 ntBASIC2.8□□□□□ -1.96
PCNAP12004 MIR4790-201ENST00000577799 79 ntBASIC2.8□□□□□ -1.96
PCNAP12004 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.8□□□□□ -1.96
PCNAP12004 AC243960.4-201ENST00000600532 288 ntBASIC2.8□□□□□ -1.96
PCNAP12004 AC024153.1-201ENST00000603103 365 ntBASIC2.8□□□□□ -1.96
PCNAP12004 AP000787.2-201ENST00000604432 568 ntBASIC2.8□□□□□ -1.96
PCNAP12004 uc_338.5-201ENST00000611839 155 ntBASIC2.8□□□□□ -1.96
PCNAP12004 AC063943.3-201ENST00000615562 356 ntBASIC2.8□□□□□ -1.96
PCNAP12004 MIR8057-201ENST00000620957 69 ntBASIC2.8□□□□□ -1.96
PCNAP12004 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.8□□□□□ -1.96
PCNAP12004 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCNAP12004 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.79□□□□□ -1.96
PCNAP12004 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCNAP12004 AL035425.3-201ENST00000564206 4996 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms