Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.09□□□□□ -2.07
HOXC4P09017 MIR4775-201ENST00000581168 75 ntBASIC2.09□□□□□ -2.07
HOXC4P09017 AC060780.3-201ENST00000589464 80 ntBASIC2.09□□□□□ -2.07
HOXC4P09017 SCARNA17.4-201ENST00000614296 143 ntBASIC2.09□□□□□ -2.07
HOXC4P09017 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
HOXC4P09017 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.09□□□□□ -2.08
HOXC4P09017 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
HOXC4P09017 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HOXC4P09017 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HOXC4P09017 AL596028.1-201ENST00000326971 197 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RNU6-61P-201ENST00000365528 109 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RNU4-48P-201ENST00000365559 182 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RNU6-1083P-201ENST00000384022 107 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RNU6-14P-201ENST00000384630 106 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RNU6-1072P-201ENST00000384703 107 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 Y_RNA.573-201ENST00000384763 105 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RNU6-443P-201ENST00000384780 107 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 MIR454-201ENST00000390180 115 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AL023284.1-201ENST00000403956 276 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 HMGB3P2-201ENST00000411913 584 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 NDUFS5P4-201ENST00000412983 318 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC4P09017 SNRPEP9-201ENST00000436794 238 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC4P09017 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC4P09017 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC4P09017 AL356010.1-201ENST00000456364 102 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 UBL5P3-201ENST00000475112 231 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AC018710.1-201ENST00000506509 158 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RBBP4P6-201ENST00000508098 202 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC4P09017 RN7SKP219-201ENST00000516825 296 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RNU6-1092P-201ENST00000516955 87 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 RNA5SP290-201ENST00000517133 127 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
HOXC4P09017 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC4P09017 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.08□□□□□ -2.08
HOXC4P09017 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.08□□□□□ -2.08
HOXC4P09017 AC023824.2-201ENST00000566185 400 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AC005730.3-201ENST00000583067 366 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AC010525.2-201ENST00000590920 195 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 U6.42-201ENST00000618440 107 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AL589994.2-201ENST00000621124 579 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AC011155.2-201ENST00000623202 216 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC4P09017 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC4P09017 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.08□□□□□ -2.08
HOXC4P09017 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HOXC4P09017 AL354685.2-201ENST00000448218 1447 ntBASIC2.08□□□□□ -2.08
HOXC4P09017 AC110491.1-201ENST00000562191 2010 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC4P09017 Y_RNA.160-201ENST00000363677 92 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 RNU6-1284P-201ENST00000363701 100 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 RNU6-960P-201ENST00000364056 120 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 Y_RNA.255-201ENST00000364581 97 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 RNU4-20P-201ENST00000365601 151 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
HOXC4P09017 RNU6-946P-201ENST00000383878 107 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 RNU6-1029P-201ENST00000384109 107 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 SNORA67.3-201ENST00000384366 140 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HOXC4P09017 AL139397.2-201ENST00000404529 772 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 NDUFS5P1-201ENST00000405668 289 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL356776.1-201ENST00000406574 447 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXC4P09017 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXC4P09017 AC092809.3-201ENST00000415453 231 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC4P09017 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC4P09017 BPY2DP-201ENST00000422208 265 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC4P09017 USP12PX-201ENST00000432383 1057 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL121601.2-201ENST00000438019 707 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 SEPT14P3-201ENST00000439401 183 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AC098831.1-201ENST00000440661 216 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL732372.2-207ENST00000445840 183 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 SEPT14P2-201ENST00000453405 183 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.07□□□□□ -2.08
HOXC4P09017 RNU7-26P-201ENST00000458980 63 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 GMFBP1-201ENST00000467831 427 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL163973.1-201ENST00000484753 577 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 RPS29P20-201ENST00000489592 171 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 RPL39P36-201ENST00000490784 156 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AC091951.2-201ENST00000500762 203 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 MTCO2P30-201ENST00000503662 364 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AC117522.1-201ENST00000509821 380 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AC098591.2-201ENST00000510152 315 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 SEPT14P4-201ENST00000513445 186 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXC4P09017 RNU6-927P-201ENST00000516199 100 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.07□□□□□ -2.08
HOXC4P09017 FO082796.1-201ENST00000523795 183 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AF235103.2-201ENST00000525753 346 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AP006587.4-201ENST00000526053 529 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 NACAP3-201ENST00000552100 481 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AL138976.2-201ENST00000563989 694 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 LRRC37A5P-203ENST00000580181 585 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 MIR5583-1-201ENST00000580941 59 ntBASIC2.07□□□□□ -2.08
HOXC4P09017 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms