Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RNU6-607P-201ENST00000411283 108 ntBASIC1.89□□□□□ -2.11
P04436 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.89□□□□□ -2.11
P04436 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.89□□□□□ -2.11
P04436 MORF4L1P6-201ENST00000418771 268 ntBASIC1.89□□□□□ -2.11
P04436 PGBD4P6-201ENST00000421501 610 ntBASIC1.89□□□□□ -2.11
P04436 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.89□□□□□ -2.11
P04436 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.89□□□□□ -2.11
P04436 MTND1P18-201ENST00000448191 573 ntBASIC1.89□□□□□ -2.11
P04436 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.89□□□□□ -2.11
P04436 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.89□□□□□ -2.11
P04436 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
P04436 RNU6-956P-201ENST00000458868 103 ntBASIC1.89□□□□□ -2.11
P04436 UBL5P3-201ENST00000475112 231 ntBASIC1.89□□□□□ -2.11
P04436 MTAPP1-201ENST00000489154 819 ntBASIC1.89□□□□□ -2.11
P04436 RPL38P4-201ENST00000502376 214 ntBASIC1.89□□□□□ -2.11
P04436 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.89□□□□□ -2.11
P04436 AC010424.1-201ENST00000506336 297 ntBASIC1.89□□□□□ -2.11
P04436 AC079140.3-201ENST00000511111 550 ntBASIC1.89□□□□□ -2.11
P04436 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.89□□□□□ -2.11
P04436 AP005435.4-201ENST00000529514 284 ntBASIC1.89□□□□□ -2.11
P04436 CR383656.8-201ENST00000549046 145 ntBASIC1.89□□□□□ -2.11
P04436 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.89□□□□□ -2.11
P04436 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.89□□□□□ -2.11
P04436 AL158827.2-201ENST00000602494 330 ntBASIC1.89□□□□□ -2.11
P04436 RMST_7.1-201ENST00000621935 268 ntBASIC1.89□□□□□ -2.11
P04436 AC009161.2-201ENST00000624626 138 ntBASIC1.89□□□□□ -2.11
P04436 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.89□□□□□ -2.11
P04436 AL691447.3-201ENST00000635020 330 ntBASIC1.89□□□□□ -2.11
P04436 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.89□□□□□ -2.11
P04436 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
P04436 AL390237.1-201ENST00000404226 1415 ntBASIC1.89□□□□□ -2.11
P04436 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.88□□□□□ -2.11
P04436 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
P04436 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
P04436 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
P04436 RNU6-1303P-201ENST00000364841 107 ntBASIC1.88□□□□□ -2.11
P04436 Y_RNA.359-201ENST00000365498 102 ntBASIC1.88□□□□□ -2.11
P04436 RNU4-48P-201ENST00000365559 182 ntBASIC1.88□□□□□ -2.11
P04436 RNU6-622P-201ENST00000384272 103 ntBASIC1.88□□□□□ -2.11
P04436 SNORD116-1-201ENST00000384335 95 ntBASIC1.88□□□□□ -2.11
P04436 RNU6-456P-201ENST00000384493 107 ntBASIC1.88□□□□□ -2.11
P04436 RNY3P9-201ENST00000384727 106 ntBASIC1.88□□□□□ -2.11
P04436 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.88□□□□□ -2.11
P04436 DEFB108C-201ENST00000400154 252 ntBASIC1.88□□□□□ -2.11
P04436 GSTA9P-201ENST00000406231 611 ntBASIC1.88□□□□□ -2.11
P04436 AL445646.1-201ENST00000431784 216 ntBASIC1.88□□□□□ -2.11
P04436 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.88□□□□□ -2.11
P04436 AL360221.1-201ENST00000445989 335 ntBASIC1.88□□□□□ -2.11
P04436 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.88□□□□□ -2.11
P04436 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.88□□□□□ -2.11
P04436 AC104435.1-201ENST00000483483 166 ntBASIC1.88□□□□□ -2.11
P04436 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.88□□□□□ -2.11
P04436 SNORA31.23-201ENST00000517219 133 ntBASIC1.88□□□□□ -2.11
P04436 BNIP3P6-201ENST00000549284 499 ntBASIC1.88□□□□□ -2.11
P04436 MIR5694-201ENST00000581190 76 ntBASIC1.88□□□□□ -2.11
P04436 AC078899.2-201ENST00000595282 212 ntBASIC1.88□□□□□ -2.11
P04436 AC109347.2-201ENST00000610220 349 ntBASIC1.88□□□□□ -2.11
P04436 MIR6715A-201ENST00000615929 79 ntBASIC1.88□□□□□ -2.11
P04436 U6.42-201ENST00000618440 107 ntBASIC1.88□□□□□ -2.11
P04436 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
P04436 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
P04436 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
P04436 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.88□□□□□ -2.11
P04436 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
P04436 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
P04436 RNU6-715P-201ENST00000365204 103 ntBASIC1.87□□□□□ -2.11
P04436 SNORA25B-201ENST00000365507 128 ntBASIC1.87□□□□□ -2.11
P04436 SNORD116-9-201ENST00000384000 95 ntBASIC1.87□□□□□ -2.11
P04436 SNORD116-3-201ENST00000384287 95 ntBASIC1.87□□□□□ -2.11
P04436 SNORD116-7-201ENST00000384404 95 ntBASIC1.87□□□□□ -2.11
P04436 SNORD116-5-201ENST00000384462 95 ntBASIC1.87□□□□□ -2.11
P04436 RNU6-45P-201ENST00000384471 107 ntBASIC1.87□□□□□ -2.11
P04436 RNU1-57P-201ENST00000384491 166 ntBASIC1.87□□□□□ -2.11
P04436 AC019129.1-201ENST00000403786 261 ntBASIC1.87□□□□□ -2.11
P04436 AL356379.1-201ENST00000414105 126 ntBASIC1.87□□□□□ -2.11
P04436 USP9YP27-201ENST00000418455 438 ntBASIC1.87□□□□□ -2.11
P04436 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.87□□□□□ -2.11
P04436 AC008267.5-201ENST00000424928 265 ntBASIC1.87□□□□□ -2.11
P04436 AIMP1P2-201ENST00000425294 312 ntBASIC1.87□□□□□ -2.11
P04436 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.87□□□□□ -2.11
P04436 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.87□□□□□ -2.11
P04436 AL596276.1-201ENST00000434465 418 ntBASIC1.87□□□□□ -2.11
P04436 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.87□□□□□ -2.11
P04436 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.87□□□□□ -2.11
P04436 RNU7-182P-201ENST00000459009 62 ntBASIC1.87□□□□□ -2.11
P04436 AC107032.1-201ENST00000485945 480 ntBASIC1.87□□□□□ -2.11
P04436 RPS27P21-201ENST00000486977 252 ntBASIC1.87□□□□□ -2.11
P04436 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.87□□□□□ -2.11
P04436 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.87□□□□□ -2.11
P04436 SNORA43.2-201ENST00000516652 128 ntBASIC1.87□□□□□ -2.11
P04436 MTND2P38-201ENST00000522536 667 ntBASIC1.87□□□□□ -2.11
P04436 AP004607.1-201ENST00000524456 203 ntBASIC1.87□□□□□ -2.11
P04436 AP002963.1-201ENST00000530590 184 ntBASIC1.87□□□□□ -2.11
P04436 SUB1P2-201ENST00000556401 297 ntBASIC1.87□□□□□ -2.11
P04436 AC233702.2-202ENST00000562547 291 ntBASIC1.87□□□□□ -2.11
P04436 AC006362.1-201ENST00000567392 174 ntBASIC1.87□□□□□ -2.11
P04436 MIR4703-201ENST00000577728 79 ntBASIC1.87□□□□□ -2.11
P04436 MIR4529-201ENST00000578110 78 ntBASIC1.87□□□□□ -2.11
P04436 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.87□□□□□ -2.11
P04436 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms