Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC090897.2-201ENST00000581715 130 ntBASIC1.59□□□□□ -2.15
CD74P04233 AL158827.2-201ENST00000602494 330 ntBASIC1.59□□□□□ -2.15
CD74P04233 Z94722.1-201ENST00000604328 474 ntBASIC1.59□□□□□ -2.15
CD74P04233 AC093788.1-201ENST00000609356 927 ntBASIC1.59□□□□□ -2.15
CD74P04233 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.59□□□□□ -2.15
CD74P04233 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.59□□□□□ -2.15
CD74P04233 AL691447.3-201ENST00000635020 330 ntBASIC1.59□□□□□ -2.15
CD74P04233 U6.114-201ENST00000636407 96 ntBASIC1.59□□□□□ -2.15
CD74P04233 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CD74P04233 WWP1P1-201ENST00000466609 2769 ntBASIC1.58□□□□□ -2.16
CD74P04233 RNU6-371P-201ENST00000364283 108 ntBASIC1.58□□□□□ -2.16
CD74P04233 SNORA16.1-201ENST00000364597 132 ntBASIC1.58□□□□□ -2.16
CD74P04233 SNORD48-201ENST00000364953 64 ntBASIC1.58□□□□□ -2.16
CD74P04233 SNORD115-7-201ENST00000365306 82 ntBASIC1.58□□□□□ -2.16
CD74P04233 Y_RNA.367-201ENST00000365544 101 ntBASIC1.58□□□□□ -2.16
CD74P04233 RNU6-72P-201ENST00000384285 79 ntBASIC1.58□□□□□ -2.16
CD74P04233 MIR1-2-201ENST00000384961 85 ntBASIC1.58□□□□□ -2.16
CD74P04233 AL049545.1-201ENST00000401856 572 ntBASIC1.58□□□□□ -2.16
CD74P04233 RN7SKP142-201ENST00000411236 328 ntBASIC1.58□□□□□ -2.16
CD74P04233 SNORD56-201ENST00000413522 71 ntBASIC1.58□□□□□ -2.16
CD74P04233 AL353621.1-201ENST00000418219 243 ntBASIC1.58□□□□□ -2.16
CD74P04233 EIF1AXP1-201ENST00000419267 435 ntBASIC1.58□□□□□ -2.16
CD74P04233 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.58□□□□□ -2.16
CD74P04233 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.58□□□□□ -2.16
CD74P04233 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.58□□□□□ -2.16
CD74P04233 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.58□□□□□ -2.16
CD74P04233 GPR143P-201ENST00000434155 205 ntBASIC1.58□□□□□ -2.16
CD74P04233 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.58□□□□□ -2.16
CD74P04233 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.58□□□□□ -2.16
CD74P04233 CALM1P1-201ENST00000442082 433 ntBASIC1.58□□□□□ -2.16
CD74P04233 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.58□□□□□ -2.16
CD74P04233 AL360271.2-201ENST00000447710 161 ntBASIC1.58□□□□□ -2.16
CD74P04233 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.58□□□□□ -2.16
CD74P04233 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.58□□□□□ -2.16
CD74P04233 RNA5SP269-201ENST00000459032 137 ntBASIC1.58□□□□□ -2.16
CD74P04233 SNORD42A-201ENST00000459584 64 ntBASIC1.58□□□□□ -2.16
CD74P04233 HMGB1P30-201ENST00000492455 606 ntBASIC1.58□□□□□ -2.16
CD74P04233 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.58□□□□□ -2.16
CD74P04233 Y_RNA.687-201ENST00000516558 91 ntBASIC1.58□□□□□ -2.16
CD74P04233 RNU5B-3P-201ENST00000516601 115 ntBASIC1.58□□□□□ -2.16
CD74P04233 RNU6-410P-201ENST00000517006 107 ntBASIC1.58□□□□□ -2.16
CD74P04233 AP005639.2-201ENST00000527592 928 ntBASIC1.58□□□□□ -2.16
CD74P04233 AC079598.5-201ENST00000547460 117 ntBASIC1.58□□□□□ -2.16
CD74P04233 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.58□□□□□ -2.16
CD74P04233 AL158211.1-201ENST00000566763 763 ntBASIC1.58□□□□□ -2.16
CD74P04233 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.58□□□□□ -2.16
CD74P04233 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.58□□□□□ -2.16
CD74P04233 MIR3913-1-201ENST00000577744 102 ntBASIC1.58□□□□□ -2.16
CD74P04233 BNIP3P30-201ENST00000601184 574 ntBASIC1.58□□□□□ -2.16
CD74P04233 SNRPGP19-201ENST00000603826 189 ntBASIC1.58□□□□□ -2.16
CD74P04233 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.58□□□□□ -2.16
CD74P04233 AC009233.1-201ENST00000616477 371 ntBASIC1.58□□□□□ -2.16
CD74P04233 AC008121.3-201ENST00000618726 433 ntBASIC1.58□□□□□ -2.16
CD74P04233 MIR6873-201ENST00000622788 63 ntBASIC1.58□□□□□ -2.16
CD74P04233 AC078883.4-201ENST00000623218 367 ntBASIC1.58□□□□□ -2.16
CD74P04233 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CD74P04233 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.57□□□□□ -2.16
CD74P04233 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 RNA5SP432-201ENST00000362480 116 ntBASIC1.57□□□□□ -2.16
CD74P04233 RNU6-1287P-201ENST00000362914 107 ntBASIC1.57□□□□□ -2.16
CD74P04233 RNU1-72P-201ENST00000362976 153 ntBASIC1.57□□□□□ -2.16
CD74P04233 RNU6-384P-201ENST00000364900 104 ntBASIC1.57□□□□□ -2.16
CD74P04233 RNU6-282P-201ENST00000365357 103 ntBASIC1.57□□□□□ -2.16
CD74P04233 RNU6-1032P-201ENST00000384100 107 ntBASIC1.57□□□□□ -2.16
CD74P04233 SNORD116-20-201ENST00000384529 92 ntBASIC1.57□□□□□ -2.16
CD74P04233 RNU6-1060P-201ENST00000384664 107 ntBASIC1.57□□□□□ -2.16
CD74P04233 AF228730.1-201ENST00000397972 663 ntBASIC1.57□□□□□ -2.16
CD74P04233 AL023284.1-201ENST00000403956 276 ntBASIC1.57□□□□□ -2.16
CD74P04233 UBE2V1P10-201ENST00000414685 269 ntBASIC1.57□□□□□ -2.16
CD74P04233 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.57□□□□□ -2.16
CD74P04233 MTCO3P5-201ENST00000433620 714 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 AC244505.5-201ENST00000443639 207 ntBASIC1.57□□□□□ -2.16
CD74P04233 MTND2P4-201ENST00000445034 1004 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC104058.1-201ENST00000448028 297 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 AL162395.1-201ENST00000457882 422 ntBASIC1.57□□□□□ -2.16
CD74P04233 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 MTND3P25-201ENST00000509243 135 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 RNU1-86P-201ENST00000516108 154 ntBASIC1.57□□□□□ -2.16
CD74P04233 RNU1-107P-201ENST00000516617 154 ntBASIC1.57□□□□□ -2.16
CD74P04233 SNORA48.11-201ENST00000517015 89 ntBASIC1.57□□□□□ -2.16
CD74P04233 RNU6-685P-201ENST00000517088 95 ntBASIC1.57□□□□□ -2.16
CD74P04233 HSPE1P18-201ENST00000517602 280 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC026407.1-201ENST00000518369 204 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 AP004607.1-201ENST00000524456 203 ntBASIC1.57□□□□□ -2.16
CD74P04233 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.57□□□□□ -2.16
CD74P04233 AC007834.2-201ENST00000536310 343 ntBASIC1.57□□□□□ -2.16
CD74P04233 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CD74P04233 OSBPL9P5-201ENST00000542581 171 ntBASIC1.57□□□□□ -2.16
CD74P04233 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.57□□□□□ -2.16
CD74P04233 HSBP1P1-201ENST00000555205 166 ntBASIC1.57□□□□□ -2.16
CD74P04233 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.57□□□□□ -2.16
CD74P04233 MIR5692A1-201ENST00000580523 69 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms