Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 SNORA31.11-201ENST00000516528 139 ntBASIC2.56□□□□□ -2
CLPTM1O96005 RNU6-256P-201ENST00000516747 97 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AP000889.2-201ENST00000532684 490 ntBASIC2.56□□□□□ -2
CLPTM1O96005 RAB11AP2-201ENST00000545905 639 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AC025423.5-201ENST00000550230 219 ntBASIC2.56□□□□□ -2
CLPTM1O96005 CYCSP39-201ENST00000565821 309 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AC005668.1-201ENST00000571142 476 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.56□□□□□ -2
CLPTM1O96005 AC090616.3-201ENST00000582184 217 ntBASIC2.56□□□□□ -2
CLPTM1O96005 HMGN2P15-201ENST00000585707 270 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AC243960.4-201ENST00000600532 288 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AL645944.1-201ENST00000603857 493 ntBASIC2.56□□□□□ -2
CLPTM1O96005 uc_338.5-201ENST00000611839 155 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AC025253.1-201ENST00000613623 543 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AC112487.2-201ENST00000637950 304 ntBASIC2.56□□□□□ -2
CLPTM1O96005 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.56□□□□□ -2
CLPTM1O96005 AC000403.1-201ENST00000613696 3585 ntBASIC2.56□□□□□ -2
CLPTM1O96005 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.56□□□□□ -2
CLPTM1O96005 Y_RNA.263-201ENST00000364659 114 ntBASIC2.55□□□□□ -2
CLPTM1O96005 RNU1-140P-201ENST00000365040 165 ntBASIC2.55□□□□□ -2
CLPTM1O96005 SNORA9.2-201ENST00000365361 133 ntBASIC2.55□□□□□ -2
CLPTM1O96005 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLPTM1O96005 RNU6-198P-201ENST00000384258 104 ntBASIC2.55□□□□□ -2
CLPTM1O96005 SNORA44-201ENST00000384584 132 ntBASIC2.55□□□□□ -2
CLPTM1O96005 Y_RNA.529-201ENST00000384586 119 ntBASIC2.55□□□□□ -2
CLPTM1O96005 SNORD73A-201ENST00000386062 65 ntBASIC2.55□□□□□ -2
CLPTM1O96005 RNU2-41P-201ENST00000410991 178 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AC007064.1-201ENST00000412238 351 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.55□□□□□ -2
CLPTM1O96005 AC016831.2-201ENST00000417179 352 ntBASIC2.55□□□□□ -2
CLPTM1O96005 Z82209.1-201ENST00000422141 2135 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AC093019.1-201ENST00000443135 252 ntBASIC2.55□□□□□ -2
CLPTM1O96005 RPL37P4-201ENST00000448908 268 ntBASIC2.55□□□□□ -2
CLPTM1O96005 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.55□□□□□ -2
CLPTM1O96005 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.55□□□□□ -2
CLPTM1O96005 snoU109.2-201ENST00000459316 135 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AC073901.1-201ENST00000462471 408 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.55□□□□□ -2
CLPTM1O96005 RNU6-1332P-201ENST00000516666 104 ntBASIC2.55□□□□□ -2
CLPTM1O96005 RNU6-703P-201ENST00000516946 107 ntBASIC2.55□□□□□ -2
CLPTM1O96005 CYCSP27-201ENST00000527643 293 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.55□□□□□ -2
CLPTM1O96005 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.55□□□□□ -2
CLPTM1O96005 MIR4782-201ENST00000577987 79 ntBASIC2.55□□□□□ -2
CLPTM1O96005 MIR3672-201ENST00000584290 82 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AC005261.5-201ENST00000596280 355 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AL670379.10-201ENST00000604330 253 ntBASIC2.55□□□□□ -2
CLPTM1O96005 APOOP1-201ENST00000604695 592 ntBASIC2.55□□□□□ -2
CLPTM1O96005 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AL670379.9-201ENST00000605428 253 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.55□□□□□ -2
CLPTM1O96005 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
CLPTM1O96005 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLPTM1O96005 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.55□□□□□ -2
CLPTM1O96005 TPTEP1-208ENST00000636884 213 ntBASIC2.55□□□□□ -2
CLPTM1O96005 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLPTM1O96005 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.54□□□□□ -2
CLPTM1O96005 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
CLPTM1O96005 RNU6-525P-201ENST00000363685 104 ntBASIC2.54□□□□□ -2
CLPTM1O96005 Y_RNA.301-201ENST00000364990 103 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.54□□□□□ -2
CLPTM1O96005 RPL26P27-201ENST00000414397 437 ntBASIC2.54□□□□□ -2
CLPTM1O96005 VN1R36P-201ENST00000414936 291 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.54□□□□□ -2
CLPTM1O96005 RPS15AP7-201ENST00000439294 405 ntBASIC2.54□□□□□ -2
CLPTM1O96005 MTND4LP16-201ENST00000440828 295 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AC233279.1-201ENST00000455300 423 ntBASIC2.54□□□□□ -2
CLPTM1O96005 MTND1P11-201ENST00000456661 876 ntBASIC2.54□□□□□ -2
CLPTM1O96005 RPS27P26-201ENST00000494583 239 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AC113155.1-201ENST00000511141 769 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AC105029.1-201ENST00000520250 669 ntBASIC2.54□□□□□ -2
CLPTM1O96005 COPS8P3-201ENST00000526024 482 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AP005597.4-201ENST00000526762 229 ntBASIC2.54□□□□□ -2
CLPTM1O96005 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.54□□□□□ -2
CLPTM1O96005 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.54□□□□□ -2
CLPTM1O96005 FGF7P1-201ENST00000582820 288 ntBASIC2.54□□□□□ -2
CLPTM1O96005 ZNF861P-201ENST00000588126 639 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AL355598.1-201ENST00000604169 202 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AL160281.1-201ENST00000605307 311 ntBASIC2.54□□□□□ -2
CLPTM1O96005 RNU6-85P-201ENST00000605989 107 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AL132765.2-201ENST00000610812 351 ntBASIC2.54□□□□□ -2
CLPTM1O96005 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.54□□□□□ -2
CLPTM1O96005 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.54□□□□□ -2
CLPTM1O96005 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLPTM1O96005 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-37P-201ENST00000362692 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 Y_RNA.212-201ENST00000364177 102 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-11P-201ENST00000364234 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-7-201ENST00000364784 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-8-201ENST00000365467 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-898P-201ENST00000365627 104 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-25P-201ENST00000383873 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-1-201ENST00000383898 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-48P-201ENST00000384161 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-36P-201ENST00000384172 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-4P-201ENST00000384205 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-5P-201ENST00000384238 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-3P-201ENST00000384314 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-16P-201ENST00000384385 107 ntBASIC2.53□□□□□ -2
CLPTM1O96005 RNU6-15P-201ENST00000384534 107 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms