Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 SNORD95.1-201ENST00000364099 68 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 RNU6-1327P-201ENST00000365302 105 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 RNU6-611P-201ENST00000384276 104 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
POLR1AO95602 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.04□□□□□ -2.4
POLR1AO95602 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.04□□□□□ -2.4
POLR1AO95602 RAB11AP1-201ENST00000442978 646 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.04□□□□□ -2.4
POLR1AO95602 OR2AQ1P-201ENST00000451972 200 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 AC244505.3-201ENST00000454598 187 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 AC098869.1-201ENST00000481627 292 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 AC091489.2-201ENST00000566263 604 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.04□□□□□ -2.4
POLR1AO95602 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.04□□□□□ -2.4
POLR1AO95602 Z82243.1-201ENST00000609432 473 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 AC017083.3-201ENST00000609955 700 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 uc_338.15-201ENST00000615470 191 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 PCMTD1P7-201ENST00000634506 357 ntBASIC0.04□□□□□ -2.4
POLR1AO95602 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.03□□□□□ -2.4
POLR1AO95602 SUMO1P1-201ENST00000497904 306 ntBASIC0.03□□□□□ -2.4
POLR1AO95602 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.03□□□□□ -2.4
POLR1AO95602 IGLVI-20-201ENST00000519296 130 ntBASIC0.03□□□□□ -2.4
POLR1AO95602 AC007834.2-201ENST00000536310 343 ntBASIC0.03□□□□□ -2.4
POLR1AO95602 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC0.03□□□□□ -2.4
POLR1AO95602 LSM6P2-201ENST00000552208 177 ntBASIC0.03□□□□□ -2.4
POLR1AO95602 AC091152.3-201ENST00000604227 325 ntBASIC0.03□□□□□ -2.4
POLR1AO95602 MTRNR2L2-201ENST00000604882 87 ntBASIC0.03□□□□□ -2.4
POLR1AO95602 AC105129.3-201ENST00000605455 485 ntBASIC0.03□□□□□ -2.4
POLR1AO95602 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.03□□□□□ -2.4
POLR1AO95602 AC092447.10-201ENST00000620607 1652 ntBASIC0.03□□□□□ -2.4
POLR1AO95602 SNORD3E-201ENST00000362899 217 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 Y_RNA.142-201ENST00000363491 102 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 RNU6-112P-201ENST00000363599 104 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 AL121978.1-201ENST00000402778 359 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.02□□□□□ -2.41
POLR1AO95602 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.02□□□□□ -2.41
POLR1AO95602 RNU5B-3P-201ENST00000516601 115 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 RNU6-1092P-201ENST00000516955 87 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.02□□□□□ -2.41
POLR1AO95602 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.02□□□□□ -2.41
POLR1AO95602 MIR3664-201ENST00000579074 99 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 MIR4493-201ENST00000584016 73 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 AL365434.2-201ENST00000607979 234 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 AC011939.3-201ENST00000613686 466 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 AL132822.1-201ENST00000617063 513 ntBASIC0.02□□□□□ -2.41
POLR1AO95602 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
POLR1AO95602 RNU6-778P-201ENST00000363269 103 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 RNU6-444P-201ENST00000383988 108 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 RNU6-546P-201ENST00000383991 107 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 SNORA51.6-201ENST00000384151 125 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 RNU6-1065P-201ENST00000384513 106 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 RNU6-30P-201ENST00000384561 107 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 PNRC2P1-201ENST00000423940 420 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 MTCO2P12-201ENST00000427426 682 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 C8orf59P1-201ENST00000429930 303 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.01□□□□□ -2.41
POLR1AO95602 AP001324.2-201ENST00000461163 319 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AC025459.1-201ENST00000504072 156 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AC113410.1-201ENST00000505029 247 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
POLR1AO95602 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.01□□□□□ -2.41
POLR1AO95602 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.01□□□□□ -2.41
POLR1AO95602 AL121579.1-201ENST00000555129 305 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AC027104.1-201ENST00000563702 681 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.01□□□□□ -2.41
POLR1AO95602 AC017037.3-201ENST00000625016 472 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 SNORD114-31-201ENST00000363219 75 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 Y_RNA.552-201ENST00000384665 112 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 RNU6-1054P-201ENST00000411293 104 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 RPS15AP9-201ENST00000439856 381 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.01□□□□□ -2.41
POLR1AO95602 AC113420.1-201ENST00000507903 571 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.01□□□□□ -2.41
POLR1AO95602 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.01□□□□□ -2.41
POLR1AO95602 BNIP3P26-201ENST00000600827 554 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 NDUFA8P1-201ENST00000605525 367 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AC240442.1-201ENST00000616055 283 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AL109620.1-201ENST00000618738 1197 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AC079416.3-201ENST00000624479 549 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 AP003400.6-201ENST00000624698 740 ntBASIC0.01□□□□□ -2.41
POLR1AO95602 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0□□□□□ -2.41
POLR1AO95602 MIR942-201ENST00000401111 86 ntBASIC0□□□□□ -2.41
POLR1AO95602 AL121578.1-201ENST00000428051 892 ntBASIC0□□□□□ -2.41
POLR1AO95602 MTCO3P18-201ENST00000440206 761 ntBASIC0□□□□□ -2.41
POLR1AO95602 MTCO3P7-201ENST00000510008 774 ntBASIC0□□□□□ -2.41
POLR1AO95602 AC010587.2-201ENST00000511727 448 ntBASIC0□□□□□ -2.41
POLR1AO95602 SNORA31.4-201ENST00000516049 129 ntBASIC0□□□□□ -2.41
POLR1AO95602 AC025423.5-201ENST00000550230 219 ntBASIC0□□□□□ -2.41
POLR1AO95602 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0□□□□□ -2.41
POLR1AO95602 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
POLR1AO95602 AP001596.2-201ENST00000608410 312 ntBASIC0□□□□□ -2.41
POLR1AO95602 AC009318.4-201ENST00000620496 486 ntBASIC0□□□□□ -2.41
POLR1AO95602 RPL22P22-201ENST00000395439 379 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 AL109755.1-201ENST00000401791 649 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 RPP40P1-201ENST00000426762 456 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.01□□□□□ -2.41
POLR1AO95602 AC092685.1-201ENST00000447960 1243 ntBASIC-0.01□□□□□ -2.41
POLR1AO95602 COX7A2P2-201ENST00000505291 250 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms