Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SNORD51.1-201ENST00000365405 77 ntBASIC0.25□□□□□ -2.37
SIX6O95475 RNU6-432P-201ENST00000384196 109 ntBASIC0.25□□□□□ -2.37
SIX6O95475 RNU6-331P-201ENST00000384724 107 ntBASIC0.25□□□□□ -2.37
SIX6O95475 MIR200A-201ENST00000384875 90 ntBASIC0.25□□□□□ -2.37
SIX6O95475 MIR194-1-201ENST00000384892 85 ntBASIC0.25□□□□□ -2.37
SIX6O95475 CBX3P9-201ENST00000402326 552 ntBASIC0.25□□□□□ -2.37
SIX6O95475 RNU6-575P-201ENST00000411326 105 ntBASIC0.25□□□□□ -2.37
SIX6O95475 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.25□□□□□ -2.37
SIX6O95475 MTND1P21-201ENST00000412991 285 ntBASIC0.25□□□□□ -2.37
SIX6O95475 TPMTP2-201ENST00000414372 726 ntBASIC0.25□□□□□ -2.37
SIX6O95475 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.25□□□□□ -2.37
SIX6O95475 COX7BP2-201ENST00000437976 242 ntBASIC0.25□□□□□ -2.37
SIX6O95475 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.25□□□□□ -2.37
SIX6O95475 RNU1-131P-201ENST00000458943 161 ntBASIC0.25□□□□□ -2.37
SIX6O95475 XACT-201ENST00000468762 497 ntTSL 5 BASIC0.25□□□□□ -2.37
SIX6O95475 AC104629.1-201ENST00000494226 508 ntBASIC0.25□□□□□ -2.37
SIX6O95475 AC093809.1-201ENST00000509155 340 ntBASIC0.25□□□□□ -2.37
SIX6O95475 AC108078.2-201ENST00000510750 236 ntBASIC0.25□□□□□ -2.37
SIX6O95475 RNA5SP481-201ENST00000516814 122 ntBASIC0.25□□□□□ -2.37
SIX6O95475 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC0.25□□□□□ -2.37
SIX6O95475 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.25□□□□□ -2.37
SIX6O95475 AC091489.2-201ENST00000566263 604 ntBASIC0.25□□□□□ -2.37
SIX6O95475 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC0.25□□□□□ -2.37
SIX6O95475 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.25□□□□□ -2.37
SIX6O95475 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.25□□□□□ -2.37
SIX6O95475 MIR1264-201ENST00000616374 69 ntBASIC0.25□□□□□ -2.37
SIX6O95475 MIR1322-201ENST00000638013 71 ntBASIC0.25□□□□□ -2.37
SIX6O95475 AC023934.1-201ENST00000574529 2389 ntBASIC0.24□□□□□ -2.37
SIX6O95475 RNU6-858P-201ENST00000362436 107 ntBASIC0.24□□□□□ -2.37
SIX6O95475 RNU1-93P-201ENST00000364704 169 ntBASIC0.24□□□□□ -2.37
SIX6O95475 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
SIX6O95475 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.24□□□□□ -2.37
SIX6O95475 AC104651.1-201ENST00000427559 735 ntBASIC0.24□□□□□ -2.37
SIX6O95475 MTCYBP15-201ENST00000433123 1127 ntBASIC0.24□□□□□ -2.37
SIX6O95475 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.24□□□□□ -2.37
SIX6O95475 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.24□□□□□ -2.37
SIX6O95475 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.24□□□□□ -2.37
SIX6O95475 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.24□□□□□ -2.37
SIX6O95475 SNRPFP3-201ENST00000457792 225 ntBASIC0.24□□□□□ -2.37
SIX6O95475 MED28P2-201ENST00000475771 317 ntBASIC0.24□□□□□ -2.37
SIX6O95475 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.24□□□□□ -2.37
SIX6O95475 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.24□□□□□ -2.37
SIX6O95475 RNU6-165P-201ENST00000517170 99 ntBASIC0.24□□□□□ -2.37
SIX6O95475 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC0.24□□□□□ -2.37
SIX6O95475 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.24□□□□□ -2.37
SIX6O95475 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.24□□□□□ -2.37
SIX6O95475 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.24□□□□□ -2.37
SIX6O95475 AL121579.1-201ENST00000555129 305 ntBASIC0.24□□□□□ -2.37
SIX6O95475 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.24□□□□□ -2.37
SIX6O95475 AC136618.2-201ENST00000575091 400 ntBASIC0.24□□□□□ -2.37
SIX6O95475 AC068790.6-201ENST00000602558 258 ntBASIC0.24□□□□□ -2.37
SIX6O95475 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.24□□□□□ -2.37
SIX6O95475 AL391994.1-201ENST00000254724 282 ntBASIC0.23□□□□□ -2.37
SIX6O95475 SNRPEP3-201ENST00000338402 276 ntBASIC0.23□□□□□ -2.37
SIX6O95475 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
SIX6O95475 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
SIX6O95475 MIR337-201ENST00000362281 93 ntBASIC0.23□□□□□ -2.37
SIX6O95475 MIR96-201ENST00000362288 78 ntBASIC0.23□□□□□ -2.37
SIX6O95475 RNU6-942P-201ENST00000363002 107 ntBASIC0.23□□□□□ -2.37
SIX6O95475 RNU6-97P-201ENST00000363387 104 ntBASIC0.23□□□□□ -2.37
SIX6O95475 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
SIX6O95475 RNU6-114P-201ENST00000384704 105 ntBASIC0.23□□□□□ -2.37
SIX6O95475 RNU6-910P-201ENST00000390844 107 ntBASIC0.23□□□□□ -2.37
SIX6O95475 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.23□□□□□ -2.37
SIX6O95475 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.23□□□□□ -2.37
SIX6O95475 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.23□□□□□ -2.37
SIX6O95475 AC002429.1-201ENST00000437672 148 ntBASIC0.23□□□□□ -2.37
SIX6O95475 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.23□□□□□ -2.37
SIX6O95475 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.23□□□□□ -2.37
SIX6O95475 AL358794.1-201ENST00000445689 381 ntBASIC0.23□□□□□ -2.37
SIX6O95475 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.23□□□□□ -2.37
SIX6O95475 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.23□□□□□ -2.37
SIX6O95475 MTCO3P42-201ENST00000509488 518 ntBASIC0.23□□□□□ -2.37
SIX6O95475 MTCO3P39-201ENST00000514812 518 ntBASIC0.23□□□□□ -2.37
SIX6O95475 RNU6-572P-201ENST00000516724 80 ntBASIC0.23□□□□□ -2.37
SIX6O95475 RN7SKP258-201ENST00000517151 304 ntBASIC0.23□□□□□ -2.37
SIX6O95475 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.23□□□□□ -2.37
SIX6O95475 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.23□□□□□ -2.37
SIX6O95475 BNIP3P30-201ENST00000601184 574 ntBASIC0.23□□□□□ -2.37
SIX6O95475 AP001981.2-201ENST00000603241 418 ntBASIC0.23□□□□□ -2.37
SIX6O95475 AL158163.2-201ENST00000619110 700 ntBASIC0.23□□□□□ -2.37
SIX6O95475 AC099654.9-201ENST00000637055 678 ntBASIC0.23□□□□□ -2.37
SIX6O95475 AC010615.1-201ENST00000594254 1764 ntBASIC0.23□□□□□ -2.37
SIX6O95475 RNU4-79P-201ENST00000362764 141 ntBASIC0.22□□□□□ -2.37
SIX6O95475 RNU6-945P-201ENST00000383947 107 ntBASIC0.22□□□□□ -2.37
SIX6O95475 MIR942-201ENST00000401111 86 ntBASIC0.22□□□□□ -2.37
SIX6O95475 Y_RNA.595-201ENST00000410403 105 ntBASIC0.22□□□□□ -2.37
SIX6O95475 Y_RNA.597-201ENST00000410463 100 ntBASIC0.22□□□□□ -2.37
SIX6O95475 AC012308.1-201ENST00000451232 178 ntBASIC0.22□□□□□ -2.37
SIX6O95475 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.22□□□□□ -2.37
SIX6O95475 RNU7-140P-201ENST00000459546 60 ntBASIC0.22□□□□□ -2.37
SIX6O95475 RN7SKP49-201ENST00000516675 260 ntBASIC0.22□□□□□ -2.37
SIX6O95475 AC018659.1-201ENST00000551083 169 ntBASIC0.22□□□□□ -2.37
SIX6O95475 MIR4714-201ENST00000580728 77 ntBASIC0.22□□□□□ -2.37
SIX6O95475 AL512605.2-201ENST00000592972 256 ntBASIC0.22□□□□□ -2.37
SIX6O95475 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.22□□□□□ -2.37
SIX6O95475 AC078795.2-201ENST00000602835 1252 ntBASIC0.22□□□□□ -2.37
SIX6O95475 AC069114.2-201ENST00000604699 304 ntBASIC0.22□□□□□ -2.37
SIX6O95475 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
SIX6O95475 ELL2P3-201ENST00000457883 1602 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms