Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 U4.7-201ENST00000638126 106 ntBASIC2.85□□□□□ -1.95
RTN3O95197 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.85□□□□□ -1.95
RTN3O95197 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
RTN3O95197 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.84□□□□□ -1.95
RTN3O95197 AC135776.4-201ENST00000624300 1904 ntBASIC2.84□□□□□ -1.95
RTN3O95197 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.84□□□□□ -1.95
RTN3O95197 OR56A5-201ENST00000340110 738 ntBASIC2.84□□□□□ -1.95
RTN3O95197 RNU6-38P-201ENST00000384085 107 ntBASIC2.84□□□□□ -1.95
RTN3O95197 MIR196B-201ENST00000384852 84 ntBASIC2.84□□□□□ -1.95
RTN3O95197 RPLP0P7-201ENST00000416050 667 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.84□□□□□ -1.95
RTN3O95197 ARL5AP1-201ENST00000418991 388 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.84□□□□□ -1.95
RTN3O95197 RNU6-333P-201ENST00000459117 107 ntBASIC2.84□□□□□ -1.95
RTN3O95197 RPL23AP45-201ENST00000476406 468 ntBASIC2.84□□□□□ -1.95
RTN3O95197 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.84□□□□□ -1.95
RTN3O95197 RPL23AP49-201ENST00000492925 468 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AC096725.1-201ENST00000514266 313 ntBASIC2.84□□□□□ -1.95
RTN3O95197 SMURF2P1-201ENST00000514992 481 ntBASIC2.84□□□□□ -1.95
RTN3O95197 SNORA25.11-201ENST00000515935 105 ntBASIC2.84□□□□□ -1.95
RTN3O95197 RNU6-189P-201ENST00000516120 101 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AC109479.2-201ENST00000517842 174 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.84□□□□□ -1.95
RTN3O95197 AC109329.2-201ENST00000519658 482 ntBASIC2.84□□□□□ -1.95
RTN3O95197 CENPUP1-201ENST00000526649 1202 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.84□□□□□ -1.95
RTN3O95197 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.84□□□□□ -1.95
RTN3O95197 TPRKBP2-201ENST00000565969 475 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.84□□□□□ -1.95
RTN3O95197 AC090897.2-201ENST00000581715 130 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AC004492.1-201ENST00000607036 742 ntBASIC2.84□□□□□ -1.95
RTN3O95197 U4.5-201ENST00000617137 123 ntBASIC2.84□□□□□ -1.95
RTN3O95197 AC068137.3-201ENST00000639191 341 ntBASIC2.84□□□□□ -1.95
RTN3O95197 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
RTN3O95197 RNU6-1010P-201ENST00000362757 107 ntBASIC2.83□□□□□ -1.96
RTN3O95197 RNA5SP219-201ENST00000390940 113 ntBASIC2.83□□□□□ -1.96
RTN3O95197 RNA5SP390-201ENST00000410191 113 ntBASIC2.83□□□□□ -1.96
RTN3O95197 RNU2-52P-201ENST00000410680 190 ntBASIC2.83□□□□□ -1.96
RTN3O95197 USP9YP27-201ENST00000418455 438 ntBASIC2.83□□□□□ -1.96
RTN3O95197 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.83□□□□□ -1.96
RTN3O95197 ARL5AP4-201ENST00000430731 512 ntBASIC2.83□□□□□ -1.96
RTN3O95197 AC112220.1-201ENST00000434628 355 ntBASIC2.83□□□□□ -1.96
RTN3O95197 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.83□□□□□ -1.96
RTN3O95197 RPL7P12-201ENST00000446719 750 ntBASIC2.83□□□□□ -1.96
RTN3O95197 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.83□□□□□ -1.96
RTN3O95197 MTND3P16-201ENST00000452205 344 ntBASIC2.83□□□□□ -1.96
RTN3O95197 AC133134.1-201ENST00000466800 359 ntBASIC2.83□□□□□ -1.96
RTN3O95197 AP001025.1-201ENST00000486139 332 ntBASIC2.83□□□□□ -1.96
RTN3O95197 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.83□□□□□ -1.96
RTN3O95197 AC010486.1-201ENST00000511793 424 ntBASIC2.83□□□□□ -1.96
RTN3O95197 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.83□□□□□ -1.96
RTN3O95197 AC109329.1-201ENST00000518744 317 ntBASIC2.83□□□□□ -1.96
RTN3O95197 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.83□□□□□ -1.96
RTN3O95197 AC105137.2-201ENST00000569073 466 ntBASIC2.83□□□□□ -1.96
RTN3O95197 VN1R80P-201ENST00000597126 338 ntBASIC2.83□□□□□ -1.96
RTN3O95197 APOOP1-201ENST00000604695 592 ntBASIC2.83□□□□□ -1.96
RTN3O95197 AC123912.5-201ENST00000605470 343 ntBASIC2.83□□□□□ -1.96
RTN3O95197 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.83□□□□□ -1.96
RTN3O95197 FER-210ENST00000628534 558 ntTSL 5 BASIC2.83□□□□□ -1.96
RTN3O95197 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTN3O95197 Y_RNA.9-201ENST00000362354 101 ntBASIC2.82□□□□□ -1.96
RTN3O95197 SNORD56.1-201ENST00000362913 68 ntBASIC2.82□□□□□ -1.96
RTN3O95197 RNU4-20P-201ENST00000365601 151 ntBASIC2.82□□□□□ -1.96
RTN3O95197 RNU6-1068P-201ENST00000410958 103 ntBASIC2.82□□□□□ -1.96
RTN3O95197 POLHP1-201ENST00000411806 470 ntBASIC2.82□□□□□ -1.96
RTN3O95197 SNORD56-201ENST00000413522 71 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AL591043.1-201ENST00000432461 424 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RTN3O95197 AC108938.1-201ENST00000451204 136 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.82□□□□□ -1.96
RTN3O95197 RPL21P99-201ENST00000480369 423 ntBASIC2.82□□□□□ -1.96
RTN3O95197 RPL38P4-201ENST00000502376 214 ntBASIC2.82□□□□□ -1.96
RTN3O95197 RNU6-377P-201ENST00000515965 102 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AC023824.2-201ENST00000566185 400 ntBASIC2.82□□□□□ -1.96
RTN3O95197 MIR3945-201ENST00000581853 98 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.82□□□□□ -1.96
RTN3O95197 AC092747.3-201ENST00000603769 301 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AC005046.1-201ENST00000608515 625 ntBASIC2.82□□□□□ -1.96
RTN3O95197 DISC2.1-201ENST00000612827 205 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AC103705.1-201ENST00000619013 241 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AL359757.2-201ENST00000624309 274 ntBASIC2.82□□□□□ -1.96
RTN3O95197 AC092608.2-201ENST00000624427 218 ntBASIC2.82□□□□□ -1.96
RTN3O95197 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.82□□□□□ -1.96
RTN3O95197 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RTN3O95197 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.82□□□□□ -1.96
RTN3O95197 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RTN3O95197 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RTN3O95197 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RTN3O95197 RNU6-527P-201ENST00000363425 104 ntBASIC2.81□□□□□ -1.96
RTN3O95197 DEFA7P-201ENST00000382676 285 ntBASIC2.81□□□□□ -1.96
RTN3O95197 Y_RNA.402-201ENST00000383972 102 ntBASIC2.81□□□□□ -1.96
RTN3O95197 MIR592-201ENST00000384959 97 ntBASIC2.81□□□□□ -1.96
RTN3O95197 MIR514A2-201ENST00000385131 88 ntBASIC2.81□□□□□ -1.96
RTN3O95197 MIR514A3-201ENST00000385132 88 ntBASIC2.81□□□□□ -1.96
RTN3O95197 RNU6-908P-201ENST00000410160 94 ntBASIC2.81□□□□□ -1.96
RTN3O95197 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.81□□□□□ -1.96
RTN3O95197 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.81□□□□□ -1.96
RTN3O95197 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.81□□□□□ -1.96
RTN3O95197 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.81□□□□□ -1.96
RTN3O95197 Y_RNA.654-201ENST00000497848 106 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms