Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.53□□□□□ -1.84
CDKL5O76039 AC005899.2-201ENST00000584353 90 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 AC078899.3-201ENST00000599065 212 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 SRGNP1-201ENST00000603392 451 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL5O76039 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.53□□□□□ -1.84
CDKL5O76039 RMST_4.1-201ENST00000616886 107 ntBASIC3.53□□□□□ -1.84
CDKL5O76039 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CDKL5O76039 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CDKL5O76039 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.53□□□□□ -1.84
CDKL5O76039 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDKL5O76039 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CDKL5O76039 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL5O76039 AC010733.2-201ENST00000589496 5702 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 Y_RNA.33-201ENST00000362591 102 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 SNORD46.1-201ENST00000364139 104 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 SNORA7.2-201ENST00000364446 145 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 MIR301A-201ENST00000385261 86 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDKL5O76039 BX276092.3-201ENST00000424182 230 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL5O76039 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL5O76039 AC011816.1-201ENST00000441346 546 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 AL731563.1-201ENST00000442202 214 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL5O76039 RPS24P6-201ENST00000452670 400 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 snoU13.22-201ENST00000459428 104 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL5O76039 AC011005.2-201ENST00000487324 359 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL5O76039 SCARNA15.2-201ENST00000516409 127 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 MIR892C-201ENST00000516410 77 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 RNU4-77P-201ENST00000516692 156 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 RNU6-143P-201ENST00000516942 93 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 RNU6-264P-201ENST00000517134 104 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.52□□□□□ -1.85
CDKL5O76039 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL5O76039 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL5O76039 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL5O76039 SNORD58B-201ENST00000607313 66 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.52□□□□□ -1.85
CDKL5O76039 AC138627.2-201ENST00000624202 601 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.52□□□□□ -1.85
CDKL5O76039 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDKL5O76039 AC008264.2-201ENST00000610193 3731 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
CDKL5O76039 AC103988.1-201ENST00000566382 2177 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 AC091812.1-201ENST00000432235 1948 ntBASIC3.52□□□□□ -1.85
CDKL5O76039 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDKL5O76039 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL5O76039 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL5O76039 RNU6-450P-201ENST00000364654 107 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 RNU6-384P-201ENST00000364900 104 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 RNU6-395P-201ENST00000365662 106 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 SET-203ENST00000372688 801 ntTSL 2 BASIC3.51□□□□□ -1.85
CDKL5O76039 RNU6-1025P-201ENST00000410629 104 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 RNU6-325P-201ENST00000411132 105 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AL592148.1-201ENST00000413568 445 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL5O76039 AC114482.1-201ENST00000418010 247 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.51□□□□□ -1.85
CDKL5O76039 AC093151.1-201ENST00000427711 313 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.51□□□□□ -1.85
CDKL5O76039 RPL23AP31-201ENST00000456160 467 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 snoU13.24-201ENST00000458998 104 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AC008571.1-201ENST00000467232 300 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL5O76039 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.51□□□□□ -1.85
CDKL5O76039 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.51□□□□□ -1.85
CDKL5O76039 AC068781.1-201ENST00000488231 618 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AC006445.1-201ENST00000491925 405 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AC105758.1-201ENST00000506038 399 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AC007536.1-201ENST00000533382 349 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 GNAI2P1-201ENST00000541815 315 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 TRAV32-201ENST00000553993 340 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
CDKL5O76039 AC110588.1-201ENST00000559699 137 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.51□□□□□ -1.85
CDKL5O76039 AC018889.1-201ENST00000605372 397 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 AL121917.1-203ENST00000605534 577 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 YPEL5P2-201ENST00000605553 359 ntBASIC3.51□□□□□ -1.85
CDKL5O76039 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CDKL5O76039 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL5O76039 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.51□□□□□ -1.85
CDKL5O76039 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CDKL5O76039 MIR208A-201ENST00000362287 71 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 Y_RNA.48-201ENST00000362710 103 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 SNORA70.4-201ENST00000365509 134 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.5□□□□□ -1.85
CDKL5O76039 Y_RNA.389-201ENST00000383924 113 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 RNU6-790P-201ENST00000384479 105 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 RNU6-174P-201ENST00000410406 106 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 RN7SKP220-201ENST00000410611 288 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 DPH3P2-201ENST00000422618 250 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.5□□□□□ -1.85
CDKL5O76039 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.5□□□□□ -1.85
CDKL5O76039 MYL8P-204ENST00000431574 518 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 AL353997.1-201ENST00000432936 108 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 FABP5P15-201ENST00000453566 214 ntBASIC3.5□□□□□ -1.85
CDKL5O76039 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms