Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.65□□□□□ -1.99
CACNA1FO60840 AC009570.1-201ENST00000609599 745 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 AL110115.1-201ENST00000614396 364 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 FRG1KP-201ENST00000623592 341 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.65□□□□□ -1.99
CACNA1FO60840 MTND4P27-201ENST00000450813 1354 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CACNA1FO60840 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.64□□□□□ -1.99
CACNA1FO60840 Y_RNA.184-201ENST00000363884 108 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 Y_RNA.339-201ENST00000365325 102 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 Y_RNA.387-201ENST00000383918 102 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 MIR504-201ENST00000385065 83 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 AL079342.1-201ENST00000401460 267 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.64□□□□□ -1.99
CACNA1FO60840 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 RPL7P46-201ENST00000425129 740 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.64□□□□□ -1.99
CACNA1FO60840 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.64□□□□□ -1.99
CACNA1FO60840 DYNLL1P5-201ENST00000467158 270 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 RNU6-189P-201ENST00000516120 101 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 SNORA31.20-201ENST00000517111 133 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 RNU6-64P-201ENST00000517119 105 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 RN7SKP258-201ENST00000517151 304 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.64□□□□□ -1.99
CACNA1FO60840 OR11H5P-201ENST00000554039 926 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 AC022432.1-201ENST00000595739 310 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 AL133393.1-201ENST00000603277 287 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 AC006329.2-201ENST00000611491 394 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 AC034102.8-201ENST00000615146 484 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 AC010378.1-201ENST00000619270 362 ntBASIC2.64□□□□□ -1.99
CACNA1FO60840 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.64□□□□□ -1.99
CACNA1FO60840 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.64□□□□□ -1.99
CACNA1FO60840 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.64□□□□□ -1.99
CACNA1FO60840 RNU6-1188P-201ENST00000363795 107 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 SNORA4.3-201ENST00000365564 137 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 Y_RNA.431-201ENST00000384086 102 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RNU6-339P-201ENST00000384310 107 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RNU6-516P-201ENST00000411381 104 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.63□□□□□ -1.99
CACNA1FO60840 SRIP2-201ENST00000428470 166 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.63□□□□□ -1.99
CACNA1FO60840 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1FO60840 RPL23AP55-201ENST00000498163 452 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 HMGN1P13-201ENST00000505795 138 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RNU6-237P-201ENST00000515985 71 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 SNORD59.2-201ENST00000516873 68 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AL163153.1-201ENST00000554223 283 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.63□□□□□ -1.99
CACNA1FO60840 MIR4775-201ENST00000581168 75 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 MIR3171-201ENST00000584270 74 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AL133255.1-201ENST00000606374 441 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC012409.4-201ENST00000612923 249 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AP001486.3-201ENST00000615334 372 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.63□□□□□ -1.99
CACNA1FO60840 AC090971.5-201ENST00000621102 293 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 MIR1302-1-201ENST00000637932 143 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.63□□□□□ -1.99
CACNA1FO60840 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1FO60840 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.63□□□□□ -1.99
CACNA1FO60840 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CACNA1FO60840 MIR369-201ENST00000362155 70 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RNU6-179P-201ENST00000363350 107 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RNU6-799P-201ENST00000363567 107 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RNU6-738P-201ENST00000384531 106 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 MIR606-201ENST00000384851 96 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AL136372.1-201ENST00000403060 228 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AL354751.2-201ENST00000415471 210 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 MTATP6P4-201ENST00000427725 675 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.63□□□□□ -1.99
CACNA1FO60840 AC006512.1-201ENST00000468816 291 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC010285.1-201ENST00000470580 392 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RPS23P3-201ENST00000470993 430 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC135721.1-201ENST00000497954 479 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 GZMAP1-201ENST00000503054 631 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC091885.1-201ENST00000506658 268 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RNU6-559P-201ENST00000516151 98 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 RNU6-864P-201ENST00000516256 108 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.63□□□□□ -1.99
CACNA1FO60840 AP005597.4-201ENST00000526762 229 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 DEFB108D-201ENST00000527787 222 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.63□□□□□ -1.99
CACNA1FO60840 AL121821.2-201ENST00000556081 394 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC078899.3-201ENST00000599065 212 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AP000787.2-201ENST00000604432 568 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 Z82243.1-201ENST00000609432 473 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AL390240.1-201ENST00000612950 384 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 SNHG22-203ENST00000617833 660 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 MIR6132-201ENST00000622083 109 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.63□□□□□ -1.99
CACNA1FO60840 AC241585.2-209ENST00000638217 143 ntBASIC2.63□□□□□ -1.99
CACNA1FO60840 Y_RNA.2-201ENST00000362330 96 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 RNU6-989P-201ENST00000362756 107 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 Y_RNA.445-201ENST00000384168 102 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CACNA1FO60840 U3.37-201ENST00000408528 213 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 RNU6-387P-201ENST00000411331 105 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 RPL37P10-201ENST00000412884 288 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.62□□□□□ -1.99
CACNA1FO60840 AL451054.2-201ENST00000420896 202 ntBASIC2.62□□□□□ -1.99
CACNA1FO60840 GTF2IP13-201ENST00000438487 386 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms