Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.39□□□□□ -2.03
SNX3O60493 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNX3O60493 AC244517.12-201ENST00000623581 663 ntBASIC2.39□□□□□ -2.03
SNX3O60493 AC024614.3-201ENST00000637860 256 ntBASIC2.39□□□□□ -2.03
SNX3O60493 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNX3O60493 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SNX3O60493 HAUS6P2-201ENST00000433254 2404 ntBASIC2.39□□□□□ -2.03
SNX3O60493 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SNX3O60493 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
SNX3O60493 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SNX3O60493 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNX3O60493 MIRLET7G-201ENST00000362280 84 ntBASIC2.38□□□□□ -2.03
SNX3O60493 MIR422A-201ENST00000362286 90 ntBASIC2.38□□□□□ -2.03
SNX3O60493 SNORD62.1-201ENST00000362541 86 ntBASIC2.38□□□□□ -2.03
SNX3O60493 Y_RNA.89-201ENST00000363031 102 ntBASIC2.38□□□□□ -2.03
SNX3O60493 RNU6-527P-201ENST00000363425 104 ntBASIC2.38□□□□□ -2.03
SNX3O60493 RNU6-522P-201ENST00000364497 107 ntBASIC2.38□□□□□ -2.03
SNX3O60493 RNU6-487P-201ENST00000365430 104 ntBASIC2.38□□□□□ -2.03
SNX3O60493 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
SNX3O60493 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
SNX3O60493 Y_RNA.599-201ENST00000410489 109 ntBASIC2.38□□□□□ -2.03
SNX3O60493 Y_RNA.619-201ENST00000410951 90 ntBASIC2.38□□□□□ -2.03
SNX3O60493 FCF1P9-201ENST00000412546 282 ntBASIC2.38□□□□□ -2.03
SNX3O60493 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX3O60493 RPL22P13-201ENST00000493291 347 ntBASIC2.38□□□□□ -2.03
SNX3O60493 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX3O60493 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX3O60493 RNU6-377P-201ENST00000515965 102 ntBASIC2.38□□□□□ -2.03
SNX3O60493 RNA5SP367-201ENST00000516557 118 ntBASIC2.38□□□□□ -2.03
SNX3O60493 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
SNX3O60493 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX3O60493 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX3O60493 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX3O60493 AL121757.2-201ENST00000611223 313 ntBASIC2.38□□□□□ -2.03
SNX3O60493 RMST_3.1-201ENST00000611651 109 ntBASIC2.38□□□□□ -2.03
SNX3O60493 AC122108.2-201ENST00000611946 526 ntBASIC2.38□□□□□ -2.03
SNX3O60493 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
SNX3O60493 ATP5A1P2-202ENST00000616464 443 ntBASIC2.38□□□□□ -2.03
SNX3O60493 AC097372.5-201ENST00000623665 376 ntBASIC2.38□□□□□ -2.03
SNX3O60493 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.38□□□□□ -2.03
SNX3O60493 MIR3688-2-201ENST00000636963 87 ntBASIC2.38□□□□□ -2.03
SNX3O60493 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.38□□□□□ -2.03
SNX3O60493 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
SNX3O60493 RNA5SP374-201ENST00000362939 125 ntBASIC2.37□□□□□ -2.03
SNX3O60493 RNU6-428P-201ENST00000362942 107 ntBASIC2.37□□□□□ -2.03
SNX3O60493 Y_RNA.256-201ENST00000364594 104 ntBASIC2.37□□□□□ -2.03
SNX3O60493 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SNX3O60493 RN7SKP27-201ENST00000410684 333 ntBASIC2.37□□□□□ -2.03
SNX3O60493 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.37□□□□□ -2.03
SNX3O60493 AC138623.1-201ENST00000418060 216 ntBASIC2.37□□□□□ -2.03
SNX3O60493 ARL5AP1-201ENST00000418991 388 ntBASIC2.37□□□□□ -2.03
SNX3O60493 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX3O60493 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX3O60493 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.37□□□□□ -2.03
SNX3O60493 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX3O60493 AC087499.2-201ENST00000432861 149 ntBASIC2.37□□□□□ -2.03
SNX3O60493 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX3O60493 AL031274.1-201ENST00000450334 232 ntBASIC2.37□□□□□ -2.03
SNX3O60493 AC092989.1-201ENST00000481235 277 ntBASIC2.37□□□□□ -2.03
SNX3O60493 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.37□□□□□ -2.03
SNX3O60493 AC083904.1-201ENST00000487828 231 ntBASIC2.37□□□□□ -2.03
SNX3O60493 AC018437.1-201ENST00000492214 406 ntBASIC2.37□□□□□ -2.03
SNX3O60493 RPL23AP49-201ENST00000492925 468 ntBASIC2.37□□□□□ -2.03
SNX3O60493 MTND1P5-201ENST00000517906 940 ntBASIC2.37□□□□□ -2.03
SNX3O60493 AP000889.2-201ENST00000532684 490 ntBASIC2.37□□□□□ -2.03
SNX3O60493 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.37□□□□□ -2.03
SNX3O60493 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX3O60493 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX3O60493 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX3O60493 MYL12BP1-201ENST00000569826 507 ntBASIC2.37□□□□□ -2.03
SNX3O60493 AC090897.2-201ENST00000581715 130 ntBASIC2.37□□□□□ -2.03
SNX3O60493 MIR3616-201ENST00000584070 92 ntBASIC2.37□□□□□ -2.03
SNX3O60493 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX3O60493 SRGNP1-201ENST00000603392 451 ntBASIC2.37□□□□□ -2.03
SNX3O60493 AC096772.1-201ENST00000609146 564 ntBASIC2.37□□□□□ -2.03
SNX3O60493 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SNX3O60493 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SNX3O60493 AC024581.2-201ENST00000619986 252 ntBASIC2.37□□□□□ -2.03
SNX3O60493 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SNX3O60493 SNORD114-19-201ENST00000363072 75 ntBASIC2.36□□□□□ -2.03
SNX3O60493 RNU6-105P-201ENST00000363909 104 ntBASIC2.36□□□□□ -2.03
SNX3O60493 RNU6-534P-201ENST00000364877 106 ntBASIC2.36□□□□□ -2.03
SNX3O60493 Y_RNA.453-201ENST00000384223 109 ntBASIC2.36□□□□□ -2.03
SNX3O60493 RNA5SP171-201ENST00000391071 115 ntBASIC2.36□□□□□ -2.03
SNX3O60493 UBA52P6-201ENST00000399822 382 ntBASIC2.36□□□□□ -2.03
SNX3O60493 AL138885.1-201ENST00000405921 675 ntBASIC2.36□□□□□ -2.03
SNX3O60493 U6atac.2-201ENST00000408644 118 ntBASIC2.36□□□□□ -2.03
SNX3O60493 Y_RNA.615-201ENST00000410769 117 ntBASIC2.36□□□□□ -2.03
SNX3O60493 RNU2-25P-201ENST00000411041 191 ntBASIC2.36□□□□□ -2.03
SNX3O60493 SRIP2-201ENST00000428470 166 ntBASIC2.36□□□□□ -2.03
SNX3O60493 AL591043.1-201ENST00000432461 424 ntBASIC2.36□□□□□ -2.03
SNX3O60493 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX3O60493 BX510359.1-201ENST00000456973 237 ntBASIC2.36□□□□□ -2.03
SNX3O60493 RNU7-138P-201ENST00000459479 64 ntBASIC2.36□□□□□ -2.03
SNX3O60493 RNU6-1069P-201ENST00000516612 133 ntBASIC2.36□□□□□ -2.03
SNX3O60493 AC109479.2-201ENST00000517842 174 ntBASIC2.36□□□□□ -2.03
SNX3O60493 AC010186.2-204ENST00000537668 439 ntBASIC2.36□□□□□ -2.03
SNX3O60493 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX3O60493 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.36□□□□□ -2.03
SNX3O60493 MIR1254-2-201ENST00000579553 63 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms