Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC073657.2-201ENST00000605661 303 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 AC096772.1-201ENST00000609146 564 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 AC009318.2-201ENST00000610917 651 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 U4.7-201ENST00000638126 106 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
GRIN3BO60391 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
GRIN3BO60391 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.35□□□□□ -1.71
GRIN3BO60391 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
GRIN3BO60391 USP8P1-201ENST00000494673 3183 ntBASIC4.35□□□□□ -1.71
GRIN3BO60391 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
GRIN3BO60391 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
GRIN3BO60391 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
GRIN3BO60391 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
GRIN3BO60391 SNORD50.1-201ENST00000362987 71 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 Y_RNA.555-201ENST00000384673 110 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 AL356968.1-201ENST00000416622 474 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.34□□□□□ -1.71
GRIN3BO60391 AL590664.1-201ENST00000448065 339 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 SNRPGP5-201ENST00000456003 220 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 AP000873.1-201ENST00000463987 400 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 RPL31P61-201ENST00000496160 376 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.34□□□□□ -1.71
GRIN3BO60391 RNU6-138P-201ENST00000515952 107 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 MIR1244-1-201ENST00000612829 85 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 AP003355.3-201ENST00000623465 114 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 SCARNA4-202ENST00000625402 129 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.34□□□□□ -1.71
GRIN3BO60391 MIR1244-3-201ENST00000635744 85 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 MIR1244-2-201ENST00000636449 85 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 MIR1244-4-202ENST00000636813 85 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 AL773545.4-201ENST00000637262 310 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 AL513478.4-201ENST00000641636 310 ntBASIC4.34□□□□□ -1.71
GRIN3BO60391 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.34□□□□□ -1.71
GRIN3BO60391 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
GRIN3BO60391 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GRIN3BO60391 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
GRIN3BO60391 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
GRIN3BO60391 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
GRIN3BO60391 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.34□□□□□ -1.72
GRIN3BO60391 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
GRIN3BO60391 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
GRIN3BO60391 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.33□□□□□ -1.72
GRIN3BO60391 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
GRIN3BO60391 RNU5E-7P-201ENST00000365290 117 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GRIN3BO60391 MTCYBP2-201ENST00000407745 171 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.33□□□□□ -1.72
GRIN3BO60391 FTH1P6-201ENST00000430768 320 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
GRIN3BO60391 AC079354.2-201ENST00000453523 154 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 RPS29P27-201ENST00000463711 170 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 RPL30P5-201ENST00000494923 336 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 YWHAEP4-201ENST00000505390 198 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 RNU6-377P-201ENST00000515965 102 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 RNU6-255P-201ENST00000516957 105 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 MIR3128-201ENST00000581957 66 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 U4.6-201ENST00000621618 127 ntBASIC4.33□□□□□ -1.72
GRIN3BO60391 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.33□□□□□ -1.72
GRIN3BO60391 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
GRIN3BO60391 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
GRIN3BO60391 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
GRIN3BO60391 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GRIN3BO60391 AC022336.2-201ENST00000568966 2538 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GRIN3BO60391 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GRIN3BO60391 MIR448-201ENST00000362131 111 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 RNU6-227P-201ENST00000362865 103 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 U3.6-201ENST00000363622 211 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 RNY3P11-201ENST00000364153 102 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 SNORA69.1-201ENST00000390904 137 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 AC092423.1-201ENST00000430165 186 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 AC133473.1-201ENST00000455173 299 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.32□□□□□ -1.72
GRIN3BO60391 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.32□□□□□ -1.72
GRIN3BO60391 SNORA25.11-201ENST00000515935 105 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 RNU6-703P-201ENST00000516946 107 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.32□□□□□ -1.72
GRIN3BO60391 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.32□□□□□ -1.72
GRIN3BO60391 MIR4435-1-201ENST00000582552 80 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 AC125232.2-201ENST00000592457 143 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 AL159153.1-201ENST00000619688 317 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GRIN3BO60391 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
GRIN3BO60391 ZNF72P-201ENST00000425869 1908 ntBASIC4.32□□□□□ -1.72
GRIN3BO60391 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GRIN3BO60391 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
GRIN3BO60391 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
GRIN3BO60391 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.32□□□□□ -1.72
GRIN3BO60391 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
GRIN3BO60391 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
GRIN3BO60391 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
GRIN3BO60391 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
GRIN3BO60391 RNA5SP502-201ENST00000362694 119 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 RNU6-428P-201ENST00000362942 107 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 Y_RNA.180-201ENST00000363867 113 ntBASIC4.31□□□□□ -1.72
GRIN3BO60391 Y_RNA.214-201ENST00000364201 112 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms