Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RN7SKP24-201ENST00000515888 284 ntBASIC2.6□□□□□ -1.99
PRKNO60260 Y_RNA.687-201ENST00000516558 91 ntBASIC2.6□□□□□ -1.99
PRKNO60260 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PRKNO60260 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.6□□□□□ -1.99
PRKNO60260 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.6□□□□□ -1.99
PRKNO60260 MIR4506-201ENST00000584693 77 ntBASIC2.6□□□□□ -1.99
PRKNO60260 POLR3GP2-201ENST00000588366 668 ntBASIC2.6□□□□□ -1.99
PRKNO60260 AC008121.1-201ENST00000603244 268 ntBASIC2.6□□□□□ -1.99
PRKNO60260 ELOCP5-201ENST00000604924 333 ntBASIC2.6□□□□□ -1.99
PRKNO60260 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PRKNO60260 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
PRKNO60260 Y_RNA.813-201ENST00000364639 102 ntBASIC2.59□□□□□ -1.99
PRKNO60260 Y_RNA.339-201ENST00000365325 102 ntBASIC2.59□□□□□ -1.99
PRKNO60260 RNU6-1329P-201ENST00000365664 107 ntBASIC2.59□□□□□ -1.99
PRKNO60260 RNU6-198P-201ENST00000384258 104 ntBASIC2.59□□□□□ -1.99
PRKNO60260 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.59□□□□□ -1.99
PRKNO60260 RPL37P10-201ENST00000412884 288 ntBASIC2.59□□□□□ -1.99
PRKNO60260 NDUFS5P4-201ENST00000412983 318 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.59□□□□□ -1.99
PRKNO60260 RPS3AP52-201ENST00000435639 297 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.59□□□□□ -1.99
PRKNO60260 MTND1P17-201ENST00000448961 204 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AL031274.1-201ENST00000450334 232 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.59□□□□□ -1.99
PRKNO60260 BTF3P15-201ENST00000455606 336 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC130509.1-201ENST00000464158 433 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC003982.1-202ENST00000469928 248 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC128713.1-201ENST00000471495 306 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC026801.1-201ENST00000497178 464 ntBASIC2.59□□□□□ -1.99
PRKNO60260 RPS27P27-201ENST00000498779 255 ntBASIC2.59□□□□□ -1.99
PRKNO60260 MTND5P5-201ENST00000503764 376 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.59□□□□□ -1.99
PRKNO60260 RNA5SP356-201ENST00000515972 94 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.59□□□□□ -1.99
PRKNO60260 LINC00933-203ENST00000559812 219 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC007151.1-201ENST00000572774 483 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.59□□□□□ -1.99
PRKNO60260 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.59□□□□□ -1.99
PRKNO60260 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.59□□□□□ -1.99
PRKNO60260 AC113139.1-201ENST00000605049 239 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC016727.1-205ENST00000605437 569 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC005046.1-201ENST00000608515 625 ntBASIC2.59□□□□□ -1.99
PRKNO60260 AC064836.2-201ENST00000609491 462 ntBASIC2.59□□□□□ -1.99
PRKNO60260 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.59□□□□□ -1.99
PRKNO60260 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.59□□□□□ -1.99
PRKNO60260 Z69720.2-201ENST00000624755 279 ntBASIC2.59□□□□□ -1.99
PRKNO60260 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.59□□□□□ -1.99
PRKNO60260 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
PRKNO60260 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.59□□□□□ -2
PRKNO60260 MTND5P7-201ENST00000413558 1798 ntBASIC2.59□□□□□ -2
PRKNO60260 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.59□□□□□ -2
PRKNO60260 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.58□□□□□ -2
PRKNO60260 SNORA5B-201ENST00000363786 132 ntBASIC2.58□□□□□ -2
PRKNO60260 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PRKNO60260 Y_RNA.384-201ENST00000383909 102 ntBASIC2.58□□□□□ -2
PRKNO60260 RNU6-72P-201ENST00000384285 79 ntBASIC2.58□□□□□ -2
PRKNO60260 RNU6-95P-201ENST00000384697 107 ntBASIC2.58□□□□□ -2
PRKNO60260 MIR181B1-201ENST00000385240 110 ntBASIC2.58□□□□□ -2
PRKNO60260 AL445529.1-201ENST00000398713 389 ntBASIC2.58□□□□□ -2
PRKNO60260 RNU4-14P-201ENST00000410858 122 ntBASIC2.58□□□□□ -2
PRKNO60260 RNU6-1304P-201ENST00000411374 106 ntBASIC2.58□□□□□ -2
PRKNO60260 AL451074.5-201ENST00000415894 435 ntBASIC2.58□□□□□ -2
PRKNO60260 AL096701.2-201ENST00000416920 238 ntBASIC2.58□□□□□ -2
PRKNO60260 SNAP23P1-201ENST00000433229 246 ntBASIC2.58□□□□□ -2
PRKNO60260 AC098831.1-201ENST00000440661 216 ntBASIC2.58□□□□□ -2
PRKNO60260 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.58□□□□□ -2
PRKNO60260 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
PRKNO60260 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.58□□□□□ -2
PRKNO60260 AL031183.1-201ENST00000457667 207 ntBASIC2.58□□□□□ -2
PRKNO60260 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.58□□□□□ -2
PRKNO60260 RNA5SP385-201ENST00000515947 110 ntBASIC2.58□□□□□ -2
PRKNO60260 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.58□□□□□ -2
PRKNO60260 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.58□□□□□ -2
PRKNO60260 HPRT1P3-201ENST00000539521 576 ntBASIC2.58□□□□□ -2
PRKNO60260 AL121917.1-203ENST00000605534 577 ntBASIC2.58□□□□□ -2
PRKNO60260 AL359757.2-201ENST00000624309 274 ntBASIC2.58□□□□□ -2
PRKNO60260 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
PRKNO60260 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.57□□□□□ -2
PRKNO60260 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.57□□□□□ -2
PRKNO60260 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.57□□□□□ -2
PRKNO60260 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.57□□□□□ -2
PRKNO60260 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
PRKNO60260 RNU4-79P-201ENST00000362764 141 ntBASIC2.57□□□□□ -2
PRKNO60260 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.57□□□□□ -2
PRKNO60260 CD24P4-201ENST00000382840 243 ntBASIC2.57□□□□□ -2
PRKNO60260 Y_RNA.510-201ENST00000384511 114 ntBASIC2.57□□□□□ -2
PRKNO60260 Y_RNA.535-201ENST00000384612 99 ntBASIC2.57□□□□□ -2
PRKNO60260 MIR518D-201ENST00000385014 87 ntBASIC2.57□□□□□ -2
PRKNO60260 AL138827.1-201ENST00000402666 306 ntBASIC2.57□□□□□ -2
PRKNO60260 RNU2-52P-201ENST00000410680 190 ntBASIC2.57□□□□□ -2
PRKNO60260 SNORD56-201ENST00000413522 71 ntBASIC2.57□□□□□ -2
PRKNO60260 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.57□□□□□ -2
PRKNO60260 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKNO60260 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.57□□□□□ -2
PRKNO60260 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.57□□□□□ -2
PRKNO60260 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.57□□□□□ -2
PRKNO60260 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.57□□□□□ -2
PRKNO60260 Y_RNA.635-201ENST00000459041 101 ntBASIC2.57□□□□□ -2
PRKNO60260 Y_RNA.632-201ENST00000459189 102 ntBASIC2.57□□□□□ -2
PRKNO60260 RPL23AP45-201ENST00000476406 468 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms