Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.21□□□□□ -1.9
RRP9O43818 SNORA31.21-201ENST00000517180 77 ntBASIC3.21□□□□□ -1.9
RRP9O43818 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RRP9O43818 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.21□□□□□ -1.9
RRP9O43818 AC022634.1-201ENST00000520765 532 ntBASIC3.21□□□□□ -1.9
RRP9O43818 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.21□□□□□ -1.9
RRP9O43818 AC010186.2-204ENST00000537668 439 ntBASIC3.21□□□□□ -1.9
RRP9O43818 OR8R1P-201ENST00000543943 764 ntBASIC3.21□□□□□ -1.9
RRP9O43818 AL121821.2-201ENST00000556081 394 ntBASIC3.21□□□□□ -1.9
RRP9O43818 MIR4286-201ENST00000580651 93 ntBASIC3.21□□□□□ -1.9
RRP9O43818 AP000654.2-201ENST00000605633 586 ntBASIC3.21□□□□□ -1.9
RRP9O43818 AC009229.3-201ENST00000608056 282 ntBASIC3.21□□□□□ -1.9
RRP9O43818 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
RRP9O43818 MAPK10-266ENST00000641066 6555 ntBASIC3.2□□□□□ -1.9
RRP9O43818 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RRP9O43818 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RRP9O43818 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RNU6-428P-201ENST00000362942 107 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RNA5SP197-201ENST00000363357 119 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RNA5SP130-201ENST00000364431 114 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RNU6-1317P-201ENST00000364582 104 ntBASIC3.2□□□□□ -1.9
RRP9O43818 Y_RNA.579-201ENST00000390939 94 ntBASIC3.2□□□□□ -1.9
RRP9O43818 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RRP9O43818 RNA5SP317-201ENST00000410176 116 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RNA5SP311-201ENST00000411290 116 ntBASIC3.2□□□□□ -1.9
RRP9O43818 SYF2P2-201ENST00000417620 583 ntBASIC3.2□□□□□ -1.9
RRP9O43818 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.2□□□□□ -1.9
RRP9O43818 USP9YP30-201ENST00000430729 455 ntBASIC3.2□□□□□ -1.9
RRP9O43818 AC236972.1-201ENST00000433225 199 ntBASIC3.2□□□□□ -1.9
RRP9O43818 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.2□□□□□ -1.9
RRP9O43818 AL513043.1-201ENST00000439124 535 ntBASIC3.2□□□□□ -1.9
RRP9O43818 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.2□□□□□ -1.9
RRP9O43818 NIPA2P5-201ENST00000452282 464 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RPL30P15-201ENST00000457129 321 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RPL9P9-202ENST00000466501 579 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RN7SL20P-201ENST00000488827 297 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RPL23AP49-201ENST00000492925 468 ntBASIC3.2□□□□□ -1.9
RRP9O43818 AC116655.1-201ENST00000508324 901 ntBASIC3.2□□□□□ -1.9
RRP9O43818 AC107222.1-201ENST00000510899 637 ntBASIC3.2□□□□□ -1.9
RRP9O43818 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.2□□□□□ -1.9
RRP9O43818 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.2□□□□□ -1.9
RRP9O43818 RNU6-581P-201ENST00000516214 105 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RNA5SP315-201ENST00000516340 116 ntBASIC3.2□□□□□ -1.9
RRP9O43818 RNA5SP312-201ENST00000517068 116 ntBASIC3.2□□□□□ -1.9
RRP9O43818 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.2□□□□□ -1.9
RRP9O43818 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.2□□□□□ -1.9
RRP9O43818 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.2□□□□□ -1.9
RRP9O43818 AL161756.2-201ENST00000604597 246 ntBASIC3.2□□□□□ -1.9
RRP9O43818 AL157817.1-201ENST00000614264 790 ntBASIC3.2□□□□□ -1.9
RRP9O43818 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.2□□□□□ -1.9
RRP9O43818 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.2□□□□□ -1.9
RRP9O43818 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.2□□□□□ -1.9
RRP9O43818 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RRP9O43818 AC135776.4-201ENST00000624300 1904 ntBASIC3.2□□□□□ -1.9
RRP9O43818 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RRP9O43818 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
RRP9O43818 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RRP9O43818 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
RRP9O43818 SNORA67.1-201ENST00000364749 141 ntBASIC3.19□□□□□ -1.9
RRP9O43818 RNU6-336P-201ENST00000364891 107 ntBASIC3.19□□□□□ -1.9
RRP9O43818 RNU6-43P-201ENST00000384302 107 ntBASIC3.19□□□□□ -1.9
RRP9O43818 Y_RNA.473-201ENST00000384333 102 ntBASIC3.19□□□□□ -1.9
RRP9O43818 RNU1-13P-201ENST00000384499 162 ntBASIC3.19□□□□□ -1.9
RRP9O43818 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RRP9O43818 RPS29P13-201ENST00000402041 169 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AL513475.1-201ENST00000406602 315 ntBASIC3.19□□□□□ -1.9
RRP9O43818 FTH1P15-201ENST00000406984 280 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AC023141.4-201ENST00000412031 328 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AL356095.1-201ENST00000417217 199 ntBASIC3.19□□□□□ -1.9
RRP9O43818 MTCO2P12-201ENST00000427426 682 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AL133396.1-201ENST00000432048 687 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AC124916.1-201ENST00000444020 547 ntBASIC3.19□□□□□ -1.9
RRP9O43818 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.19□□□□□ -1.9
RRP9O43818 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.19□□□□□ -1.9
RRP9O43818 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.19□□□□□ -1.9
RRP9O43818 ELOCP24-201ENST00000456370 334 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.19□□□□□ -1.9
RRP9O43818 MRPL42P6-201ENST00000486397 371 ntBASIC3.19□□□□□ -1.9
RRP9O43818 Y_RNA.670-201ENST00000516255 105 ntBASIC3.19□□□□□ -1.9
RRP9O43818 RNU6-1213P-201ENST00000517075 94 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AC093249.1-201ENST00000567049 203 ntBASIC3.19□□□□□ -1.9
RRP9O43818 CPDP1-201ENST00000579660 283 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.19□□□□□ -1.9
RRP9O43818 AC011494.1-201ENST00000596454 237 ntBASIC3.19□□□□□ -1.9
RRP9O43818 SRGNP1-201ENST00000603392 451 ntBASIC3.19□□□□□ -1.9
RRP9O43818 RNU1-30P-201ENST00000606575 163 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AC005046.1-201ENST00000608515 625 ntBASIC3.19□□□□□ -1.9
RRP9O43818 AC090971.5-201ENST00000621102 293 ntBASIC3.19□□□□□ -1.9
RRP9O43818 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RRP9O43818 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.19□□□□□ -1.9
RRP9O43818 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RRP9O43818 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
RRP9O43818 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
RRP9O43818 RLIMP1-201ENST00000339626 1680 ntBASIC3.18□□□□□ -1.9
RRP9O43818 RNU6-858P-201ENST00000362436 107 ntBASIC3.18□□□□□ -1.9
RRP9O43818 RNU6-527P-201ENST00000363425 104 ntBASIC3.18□□□□□ -1.9
RRP9O43818 Y_RNA.146-201ENST00000363549 102 ntBASIC3.18□□□□□ -1.9
RRP9O43818 RNU6-105P-201ENST00000363909 104 ntBASIC3.18□□□□□ -1.9
RRP9O43818 Y_RNA.394-201ENST00000383942 103 ntBASIC3.18□□□□□ -1.9
RRP9O43818 SNORD116-20-201ENST00000384529 92 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms