Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
TRAF3IP2O43734 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 RNU6-715P-201ENST00000365204 103 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 RNU6-898P-201ENST00000365627 104 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 RNU6-45P-201ENST00000384471 107 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 RNU6-19P-201ENST00000384718 107 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 RNU6-903P-201ENST00000391270 109 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 SNORA11.4-201ENST00000408823 129 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 RPL21P90-201ENST00000415692 466 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 WARS2P1-201ENST00000429678 537 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MICF-203ENST00000432679 129 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC000111.3-201ENST00000433478 193 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC073415.1-201ENST00000449240 153 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 SNRPFP3-201ENST00000457792 225 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 RNU7-26P-201ENST00000458980 63 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AL163973.1-201ENST00000484753 577 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MTAPP1-201ENST00000489154 819 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC116655.1-201ENST00000508324 901 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MIR892C-201ENST00000516410 77 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AP004607.1-201ENST00000524456 203 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC104383.1-201ENST00000530297 370 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AL137161.1-201ENST00000532231 390 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC092325.1-201ENST00000566449 554 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MTATP6P3-201ENST00000581686 676 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MIR3616-201ENST00000584070 92 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC005261.5-201ENST00000596280 355 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 AC073539.2-201ENST00000597113 165 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 BNIP3P30-201ENST00000601184 574 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MIR6873-201ENST00000622788 63 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MIR6863-201ENST00000636112 90 ntBASIC1.89□□□□□ -2.11
TRAF3IP2O43734 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
TRAF3IP2O43734 MTND5P30-201ENST00000452896 1731 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 HAUS6P2-201ENST00000433254 2404 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 Y_RNA.255-201ENST00000364581 97 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU6-384P-201ENST00000364900 104 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU6-1280P-201ENST00000365211 107 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNA5SP37-201ENST00000365420 130 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 Y_RNA.399-201ENST00000383955 105 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU6-72P-201ENST00000384285 79 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 SNORA51.11-201ENST00000384442 131 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU6-1127P-201ENST00000384580 107 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 MIR10A-201ENST00000385043 110 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC068050.1-201ENST00000394891 380 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RAP1BP3-201ENST00000407180 549 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU2-3P-201ENST00000410144 191 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 UBE2V1P10-201ENST00000414685 269 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 MTND1P23-201ENST00000416931 372 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC016691.1-201ENST00000441321 413 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC096638.1-201ENST00000444678 216 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC006026.2-201ENST00000457376 180 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AL441985.1-201ENST00000457727 251 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 SRRM1P2-201ENST00000464531 1192 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC019235.1-201ENST00000503847 207 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU1-86P-201ENST00000516108 154 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 SCARNA17.1-201ENST00000516211 143 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 SCARNA17.2-201ENST00000516334 143 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU1-107P-201ENST00000516617 154 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 ACA59.2-201ENST00000517061 156 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC245505.1-201ENST00000556398 224 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 MIR3117-201ENST00000584034 78 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AL356280.1-201ENST00000603614 379 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 RNU6-91P-201ENST00000607774 107 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAF3IP2O43734 SCARNA17.4-201ENST00000614296 143 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC022418.1-201ENST00000624118 445 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC139792.2-201ENST00000624218 587 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AC004520.1-201ENST00000608362 1413 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 AP006437.1-201ENST00000641440 3685 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
TRAF3IP2O43734 MTND4P14-201ENST00000435799 1354 ntBASIC1.87□□□□□ -2.11
TRAF3IP2O43734 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAF3IP2O43734 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAF3IP2O43734 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms