Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 MIR9-1-201ENST00000385198 89 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU6-482P-201ENST00000391068 107 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AL162578.1-201ENST00000406202 378 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU4-26P-201ENST00000410270 107 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RPL26P27-201ENST00000414397 437 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RPL21P90-201ENST00000415692 466 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AC099548.1-201ENST00000421443 426 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.28□□□□□ -2.04
PHF1O43189 AL513185.2-201ENST00000425543 193 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AC009414.1-201ENST00000427200 443 ntBASIC2.28□□□□□ -2.04
PHF1O43189 MTND3P10-201ENST00000450967 341 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AP000705.1-201ENST00000454567 350 ntBASIC2.28□□□□□ -2.04
PHF1O43189 snoU13.28-201ENST00000459235 104 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RPL23AP70-201ENST00000483361 460 ntBASIC2.28□□□□□ -2.04
PHF1O43189 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.28□□□□□ -2.04
PHF1O43189 TBCAP3-201ENST00000512475 312 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU1-86P-201ENST00000516108 154 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU6-189P-201ENST00000516120 101 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNA5SP148-201ENST00000516527 94 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU1-107P-201ENST00000516617 154 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU6-928P-201ENST00000516876 104 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU6-548P-201ENST00000517083 115 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RNU6-1314P-201ENST00000517139 104 ntBASIC2.28□□□□□ -2.04
PHF1O43189 SNORA25.17-201ENST00000517184 124 ntBASIC2.28□□□□□ -2.04
PHF1O43189 RPL7P20-201ENST00000520308 745 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AC025755.1-201ENST00000521306 278 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AC004486.1-201ENST00000546846 233 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AL391261.3-201ENST00000557194 520 ntBASIC2.28□□□□□ -2.04
PHF1O43189 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
PHF1O43189 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.28□□□□□ -2.04
PHF1O43189 AC103810.1-201ENST00000579873 453 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AC090616.3-201ENST00000582184 217 ntBASIC2.28□□□□□ -2.04
PHF1O43189 VN1R80P-201ENST00000597126 338 ntBASIC2.28□□□□□ -2.04
PHF1O43189 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.28□□□□□ -2.04
PHF1O43189 AL355598.1-201ENST00000604169 202 ntBASIC2.28□□□□□ -2.04
PHF1O43189 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
PHF1O43189 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PHF1O43189 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.05
PHF1O43189 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
PHF1O43189 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.27□□□□□ -2.05
PHF1O43189 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.27□□□□□ -2.05
PHF1O43189 RNU1-105P-201ENST00000363470 161 ntBASIC2.27□□□□□ -2.05
PHF1O43189 SNORA72.1-201ENST00000363485 129 ntBASIC2.27□□□□□ -2.05
PHF1O43189 Y_RNA.160-201ENST00000363677 92 ntBASIC2.27□□□□□ -2.05
PHF1O43189 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PHF1O43189 Z98749.2-208ENST00000381646 500 ntBASIC2.27□□□□□ -2.05
PHF1O43189 RNU1-73P-201ENST00000383971 164 ntBASIC2.27□□□□□ -2.05
PHF1O43189 Y_RNA.480-201ENST00000384364 102 ntBASIC2.27□□□□□ -2.05
PHF1O43189 Y_RNA.530-201ENST00000384587 101 ntBASIC2.27□□□□□ -2.05
PHF1O43189 RNA5SP354-201ENST00000391247 136 ntBASIC2.27□□□□□ -2.05
PHF1O43189 HMGN2P35-201ENST00000412164 270 ntBASIC2.27□□□□□ -2.05
PHF1O43189 NDUFS5P4-201ENST00000412983 318 ntBASIC2.27□□□□□ -2.05
PHF1O43189 USP9YP20-201ENST00000419224 558 ntBASIC2.27□□□□□ -2.05
PHF1O43189 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.27□□□□□ -2.05
PHF1O43189 AL603825.1-201ENST00000438481 80 ntBASIC2.27□□□□□ -2.05
PHF1O43189 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.27□□□□□ -2.05
PHF1O43189 AL353572.1-201ENST00000442490 417 ntBASIC2.27□□□□□ -2.05
PHF1O43189 PRPS1P1-201ENST00000445305 876 ntBASIC2.27□□□□□ -2.05
PHF1O43189 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.27□□□□□ -2.05
PHF1O43189 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.27□□□□□ -2.05
PHF1O43189 RPS3P1-201ENST00000456781 192 ntBASIC2.27□□□□□ -2.05
PHF1O43189 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.27□□□□□ -2.05
PHF1O43189 MTND3P25-201ENST00000509243 135 ntBASIC2.27□□□□□ -2.05
PHF1O43189 SNORA14.1-201ENST00000516113 141 ntBASIC2.27□□□□□ -2.05
PHF1O43189 RNU6-1069P-201ENST00000516612 133 ntBASIC2.27□□□□□ -2.05
PHF1O43189 BTF3P12-201ENST00000519620 469 ntBASIC2.27□□□□□ -2.05
PHF1O43189 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.27□□□□□ -2.05
PHF1O43189 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.27□□□□□ -2.05
PHF1O43189 IGKV3-31-201ENST00000523109 329 ntBASIC2.27□□□□□ -2.05
PHF1O43189 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.27□□□□□ -2.05
PHF1O43189 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.27□□□□□ -2.05
PHF1O43189 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.27□□□□□ -2.05
PHF1O43189 MIR3670-2-201ENST00000582974 65 ntBASIC2.27□□□□□ -2.05
PHF1O43189 MIR3670-1-201ENST00000584160 65 ntBASIC2.27□□□□□ -2.05
PHF1O43189 MIR3670-3-201ENST00000584855 65 ntBASIC2.27□□□□□ -2.05
PHF1O43189 MIR3670-4-201ENST00000612260 65 ntBASIC2.27□□□□□ -2.05
PHF1O43189 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PHF1O43189 U6.42-201ENST00000618440 107 ntBASIC2.27□□□□□ -2.05
PHF1O43189 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.27□□□□□ -2.05
PHF1O43189 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.27□□□□□ -2.05
PHF1O43189 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
PHF1O43189 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
PHF1O43189 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.27□□□□□ -2.05
PHF1O43189 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.27□□□□□ -2.05
PHF1O43189 MTND4P35-201ENST00000604257 1375 ntBASIC2.26□□□□□ -2.05
PHF1O43189 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
PHF1O43189 RNU6-1303P-201ENST00000364841 107 ntBASIC2.26□□□□□ -2.05
PHF1O43189 SNORA67.4-201ENST00000384688 142 ntBASIC2.26□□□□□ -2.05
PHF1O43189 MIR518D-201ENST00000385014 87 ntBASIC2.26□□□□□ -2.05
PHF1O43189 RNU6-876P-201ENST00000391295 104 ntBASIC2.26□□□□□ -2.05
PHF1O43189 EIF4E2P1-201ENST00000393781 255 ntBASIC2.26□□□□□ -2.05
PHF1O43189 AL513475.1-201ENST00000406602 315 ntBASIC2.26□□□□□ -2.05
PHF1O43189 RNA5SP21-201ENST00000410917 96 ntBASIC2.26□□□□□ -2.05
PHF1O43189 Y_RNA.623-201ENST00000411128 95 ntBASIC2.26□□□□□ -2.05
PHF1O43189 HMGB1P9-201ENST00000429856 646 ntBASIC2.26□□□□□ -2.05
PHF1O43189 AL627311.1-201ENST00000431514 115 ntBASIC2.26□□□□□ -2.05
PHF1O43189 AL591806.2-201ENST00000433122 173 ntBASIC2.26□□□□□ -2.05
PHF1O43189 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.26□□□□□ -2.05
PHF1O43189 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.26□□□□□ -2.05
PHF1O43189 AC007547.1-201ENST00000462177 490 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms