Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PHGDHO43175 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PHGDHO43175 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
PHGDHO43175 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.22□□□□□ -1.89
PHGDHO43175 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PHGDHO43175 U3.6-201ENST00000363622 211 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 MIR544A-201ENST00000384855 91 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 MIR490-201ENST00000384865 128 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 Y_RNA.579-201ENST00000390939 94 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 BTF3L4P2-201ENST00000392798 346 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AP000275.1-201ENST00000411943 390 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AF228730.4-201ENST00000421457 183 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AL358075.3-201ENST00000426289 226 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AC091286.1-201ENST00000431233 461 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.22□□□□□ -1.89
PHGDHO43175 AC009969.1-201ENST00000438726 172 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.22□□□□□ -1.89
PHGDHO43175 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.22□□□□□ -1.89
PHGDHO43175 RPS29P12-201ENST00000460178 152 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AP001324.2-201ENST00000461163 319 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 SNRPGP7-201ENST00000469016 106 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AC097462.2-201ENST00000504623 481 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 SNORA67.7-201ENST00000516664 135 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AC245166.1-201ENST00000521012 253 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.22□□□□□ -1.89
PHGDHO43175 AC090897.2-201ENST00000581715 130 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 SNORA51-201ENST00000606420 132 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AC099778.2-201ENST00000610904 211 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AL157817.1-201ENST00000614264 790 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.22□□□□□ -1.89
PHGDHO43175 AC103988.1-201ENST00000566382 2177 ntBASIC3.22□□□□□ -1.89
PHGDHO43175 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
PHGDHO43175 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.89
PHGDHO43175 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
PHGDHO43175 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.21□□□□□ -1.9
PHGDHO43175 Y_RNA.138-201ENST00000363462 102 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 Y_RNA.404-201ENST00000383978 102 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 RNU6-842P-201ENST00000384269 107 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 RNU6-622P-201ENST00000384272 103 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 RNU6-310P-201ENST00000384655 107 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 RNU6-1011P-201ENST00000384668 107 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 MIR449B-201ENST00000384995 97 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 Y_RNA.646-201ENST00000410980 101 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.21□□□□□ -1.9
PHGDHO43175 GOT2P5-201ENST00000433995 546 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 RPS29P27-201ENST00000463711 170 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.21□□□□□ -1.9
PHGDHO43175 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 CKS1BP7-201ENST00000522230 235 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.21□□□□□ -1.9
PHGDHO43175 MTCO3P13-201ENST00000577757 781 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 MIR4273-201ENST00000582824 84 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 AC008739.2-201ENST00000597006 317 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 AC078795.3-201ENST00000602913 472 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 AL133393.1-201ENST00000603277 287 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 RNU6-91P-201ENST00000607774 107 ntBASIC3.21□□□□□ -1.9
PHGDHO43175 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.21□□□□□ -1.9
PHGDHO43175 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.21□□□□□ -1.9
PHGDHO43175 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.21□□□□□ -1.9
PHGDHO43175 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
PHGDHO43175 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PHGDHO43175 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
PHGDHO43175 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
PHGDHO43175 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.2□□□□□ -1.9
PHGDHO43175 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.2□□□□□ -1.9
PHGDHO43175 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PHGDHO43175 Y_RNA.315-201ENST00000365117 102 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 RNA5SP390-201ENST00000410191 113 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 RNU6-1140P-201ENST00000410517 106 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.2□□□□□ -1.9
PHGDHO43175 AC138623.1-201ENST00000418060 216 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 USMG5P1-201ENST00000425964 177 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 SAR1AP4-201ENST00000429225 591 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.2□□□□□ -1.9
PHGDHO43175 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PHGDHO43175 MTCO3P10-201ENST00000455912 772 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.2□□□□□ -1.9
PHGDHO43175 RPL30P12-201ENST00000474666 353 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 RN7SL283P-201ENST00000489055 303 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.2□□□□□ -1.9
PHGDHO43175 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.2□□□□□ -1.9
PHGDHO43175 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.2□□□□□ -1.9
PHGDHO43175 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
PHGDHO43175 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PHGDHO43175 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PHGDHO43175 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
PHGDHO43175 AC093010.3-201ENST00000570269 15214 ntBASIC3.2□□□□□ -1.9
PHGDHO43175 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PHGDHO43175 AC009541.1-201ENST00000438279 2662 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AC110774.1-201ENST00000623567 2018 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 Y_RNA.123-201ENST00000363338 102 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 RNU6-596P-201ENST00000365395 98 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 RNU6-43P-201ENST00000384302 107 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 RNU6-174P-201ENST00000410406 106 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 RPL32P35-201ENST00000415214 394 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AL354751.2-201ENST00000415471 210 ntBASIC3.19□□□□□ -1.9
PHGDHO43175 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.19□□□□□ -1.9
PHGDHO43175 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.19□□□□□ -1.9
PHGDHO43175 RNU7-152P-201ENST00000458982 64 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms