Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
CDX4O14627 DUXAP9-208ENST00000622815 614 ntBASIC2.22□□□□□ -2.05
CDX4O14627 U6.99-201ENST00000637524 83 ntBASIC2.22□□□□□ -2.05
CDX4O14627 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDX4O14627 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDX4O14627 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDX4O14627 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
CDX4O14627 AC103710.2-202ENST00000641454 2853 ntBASIC2.21□□□□□ -2.06
CDX4O14627 RNU5E-4P-201ENST00000364931 120 ntBASIC2.21□□□□□ -2.06
CDX4O14627 RNU6-61P-201ENST00000365528 109 ntBASIC2.21□□□□□ -2.06
CDX4O14627 SET-203ENST00000372688 801 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX4O14627 RNU1-109P-201ENST00000383960 147 ntBASIC2.21□□□□□ -2.06
CDX4O14627 RNU6-1029P-201ENST00000384109 107 ntBASIC2.21□□□□□ -2.06
CDX4O14627 RNU6-658P-201ENST00000384606 106 ntBASIC2.21□□□□□ -2.06
CDX4O14627 MIR221-201ENST00000385135 110 ntBASIC2.21□□□□□ -2.06
CDX4O14627 FGF7P8-201ENST00000402994 292 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AL590004.2-201ENST00000404787 371 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AC138393.2-201ENST00000414742 246 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AC092809.3-201ENST00000415453 231 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX4O14627 AL096701.2-201ENST00000416920 238 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX4O14627 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX4O14627 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX4O14627 RPS15AP28-201ENST00000435088 386 ntBASIC2.21□□□□□ -2.06
CDX4O14627 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX4O14627 AC073415.1-201ENST00000449240 153 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AL118520.1-201ENST00000450770 291 ntBASIC2.21□□□□□ -2.06
CDX4O14627 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX4O14627 RNU7-182P-201ENST00000459009 62 ntBASIC2.21□□□□□ -2.06
CDX4O14627 ADAM3A-203ENST00000461344 2157 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.21□□□□□ -2.06
CDX4O14627 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.21□□□□□ -2.06
CDX4O14627 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.21□□□□□ -2.06
CDX4O14627 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX4O14627 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX4O14627 AC118273.2-201ENST00000532092 465 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AC007336.1-201ENST00000576365 3828 ntBASIC2.21□□□□□ -2.06
CDX4O14627 MIR4782-201ENST00000577987 79 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AC090616.3-201ENST00000582184 217 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AC107871.2-201ENST00000612894 502 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AC022306.2-201ENST00000617563 647 ntBASIC2.21□□□□□ -2.06
CDX4O14627 U6.42-201ENST00000618440 107 ntBASIC2.21□□□□□ -2.06
CDX4O14627 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX4O14627 AC011155.2-201ENST00000623202 216 ntBASIC2.21□□□□□ -2.06
CDX4O14627 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX4O14627 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX4O14627 SNORA72.1-201ENST00000363485 129 ntBASIC2.2□□□□□ -2.06
CDX4O14627 SNORD115-7-201ENST00000365306 82 ntBASIC2.2□□□□□ -2.06
CDX4O14627 Y_RNA.576-201ENST00000384781 102 ntBASIC2.2□□□□□ -2.06
CDX4O14627 RNU6-903P-201ENST00000391270 109 ntBASIC2.2□□□□□ -2.06
CDX4O14627 Y_RNA.595-201ENST00000410403 105 ntBASIC2.2□□□□□ -2.06
CDX4O14627 RNU6-1025P-201ENST00000410629 104 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 CYCSP49-201ENST00000420810 319 ntBASIC2.2□□□□□ -2.06
CDX4O14627 SKA2P1-201ENST00000425592 390 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 AC092427.1-202ENST00000430569 476 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.2□□□□□ -2.06
CDX4O14627 MTND1P18-201ENST00000448191 573 ntBASIC2.2□□□□□ -2.06
CDX4O14627 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 GMFBP1-201ENST00000467831 427 ntBASIC2.2□□□□□ -2.06
CDX4O14627 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.2□□□□□ -2.06
CDX4O14627 RPS29P20-201ENST00000489592 171 ntBASIC2.2□□□□□ -2.06
CDX4O14627 EIF4EP3-201ENST00000498782 656 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC018710.1-201ENST00000506509 158 ntBASIC2.2□□□□□ -2.06
CDX4O14627 RBBP4P6-201ENST00000508098 202 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 AC113155.1-201ENST00000511141 769 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.2□□□□□ -2.06
CDX4O14627 AC105417.1-201ENST00000514691 285 ntBASIC2.2□□□□□ -2.06
CDX4O14627 RNU6-123P-201ENST00000516163 102 ntBASIC2.2□□□□□ -2.06
CDX4O14627 RNA5SP503-201ENST00000517047 117 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.2□□□□□ -2.06
CDX4O14627 AF235103.2-201ENST00000525753 346 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AP005435.4-201ENST00000529514 284 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.2□□□□□ -2.06
CDX4O14627 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 OR1M4P-201ENST00000589199 287 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC060780.3-201ENST00000589464 80 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC010525.2-201ENST00000590920 195 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.2□□□□□ -2.06
CDX4O14627 RPL23AP88-201ENST00000605759 454 ntBASIC2.2□□□□□ -2.06
CDX4O14627 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC092794.2-201ENST00000620933 563 ntBASIC2.2□□□□□ -2.06
CDX4O14627 AC009033.1-201ENST00000624279 431 ntBASIC2.2□□□□□ -2.06
CDX4O14627 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDX4O14627 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDX4O14627 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
CDX4O14627 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.2□□□□□ -2.06
CDX4O14627 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
CDX4O14627 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CDX4O14627 AL354685.2-201ENST00000448218 1447 ntBASIC2.19□□□□□ -2.06
CDX4O14627 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
CDX4O14627 RNU1-17P-201ENST00000363022 152 ntBASIC2.19□□□□□ -2.06
CDX4O14627 Y_RNA.160-201ENST00000363677 92 ntBASIC2.19□□□□□ -2.06
CDX4O14627 SNORA4.3-201ENST00000365564 137 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms