Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.27□□□□□ -2.21
UPK2O00526 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.27□□□□□ -2.21
UPK2O00526 AC010928.2-201ENST00000588017 287 ntBASIC1.27□□□□□ -2.21
UPK2O00526 AL031775.1-201ENST00000607014 887 ntBASIC1.27□□□□□ -2.21
UPK2O00526 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.27□□□□□ -2.21
UPK2O00526 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.27□□□□□ -2.21
UPK2O00526 MIR6845-201ENST00000613182 61 ntBASIC1.27□□□□□ -2.21
UPK2O00526 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.27□□□□□ -2.21
UPK2O00526 AL590240.4-201ENST00000616908 390 ntBASIC1.27□□□□□ -2.21
UPK2O00526 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.27□□□□□ -2.21
UPK2O00526 AL359740.1-201ENST00000624340 592 ntBASIC1.27□□□□□ -2.21
UPK2O00526 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
UPK2O00526 AC007671.2-201ENST00000637344 619 ntBASIC1.27□□□□□ -2.21
UPK2O00526 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.27□□□□□ -2.21
UPK2O00526 AC002543.1-201ENST00000299783 1954 ntBASIC1.27□□□□□ -2.21
UPK2O00526 RNU6-78P-201ENST00000362897 107 ntBASIC1.26□□□□□ -2.21
UPK2O00526 Y_RNA.99-201ENST00000363138 105 ntBASIC1.26□□□□□ -2.21
UPK2O00526 RNU6-371P-201ENST00000364283 108 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK2O00526 BTF3L4P1-201ENST00000413813 468 ntBASIC1.26□□□□□ -2.21
UPK2O00526 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK2O00526 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.26□□□□□ -2.21
UPK2O00526 AL358453.1-201ENST00000422522 250 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK2O00526 TOMM20P4-201ENST00000427861 435 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AL365184.2-201ENST00000431139 435 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.26□□□□□ -2.21
UPK2O00526 MTND2P39-201ENST00000457230 764 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK2O00526 RNU6-1220P-201ENST00000517126 108 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.26□□□□□ -2.21
UPK2O00526 MTND2P7-201ENST00000521337 640 ntBASIC1.26□□□□□ -2.21
UPK2O00526 EEF1A1P37-201ENST00000522748 715 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.26□□□□□ -2.21
UPK2O00526 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.26□□□□□ -2.21
UPK2O00526 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UPK2O00526 AC008521.1-201ENST00000587471 187 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AL353778.1-201ENST00000603149 408 ntBASIC1.26□□□□□ -2.21
UPK2O00526 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.26□□□□□ -2.21
UPK2O00526 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AC131159.1-201ENST00000621854 213 ntBASIC1.26□□□□□ -2.21
UPK2O00526 RMST_7.1-201ENST00000621935 268 ntBASIC1.26□□□□□ -2.21
UPK2O00526 AL078595.3-201ENST00000623815 1166 ntBASIC1.26□□□□□ -2.21
UPK2O00526 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.26□□□□□ -2.21
UPK2O00526 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.26□□□□□ -2.21
UPK2O00526 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UPK2O00526 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
UPK2O00526 SNORD113-6-201ENST00000363345 75 ntBASIC1.25□□□□□ -2.21
UPK2O00526 RNA5SP493-201ENST00000364115 91 ntBASIC1.25□□□□□ -2.21
UPK2O00526 SNORD114-6-201ENST00000364393 72 ntBASIC1.25□□□□□ -2.21
UPK2O00526 SNORA48.1-201ENST00000390879 135 ntBASIC1.25□□□□□ -2.21
UPK2O00526 SNORA12-201ENST00000391162 147 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AL627390.1-201ENST00000396055 340 ntBASIC1.25□□□□□ -2.21
UPK2O00526 MIR934-201ENST00000401241 83 ntBASIC1.25□□□□□ -2.21
UPK2O00526 RNU2-39P-201ENST00000410604 198 ntBASIC1.25□□□□□ -2.21
UPK2O00526 Y_RNA.608-201ENST00000410647 95 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AC106883.1-201ENST00000418805 562 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.25□□□□□ -2.21
UPK2O00526 AC137499.1-201ENST00000427602 88 ntBASIC1.25□□□□□ -2.21
UPK2O00526 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK2O00526 RPS24P1-201ENST00000438550 371 ntBASIC1.25□□□□□ -2.21
UPK2O00526 HMGB1P18-201ENST00000438801 619 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AL606662.1-201ENST00000445763 553 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.25□□□□□ -2.21
UPK2O00526 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK2O00526 AC006026.2-201ENST00000457376 180 ntBASIC1.25□□□□□ -2.21
UPK2O00526 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.25□□□□□ -2.21
UPK2O00526 AC023790.1-201ENST00000482174 347 ntBASIC1.25□□□□□ -2.21
UPK2O00526 MTND3P25-201ENST00000509243 135 ntBASIC1.25□□□□□ -2.21
UPK2O00526 SNORA25.15-201ENST00000516487 89 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK2O00526 AC022880.1-201ENST00000534017 973 ntBASIC1.25□□□□□ -2.21
UPK2O00526 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
UPK2O00526 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.25□□□□□ -2.21
UPK2O00526 MTND1P8-201ENST00000571424 950 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AC137800.2-201ENST00000574375 120 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AC091135.1-201ENST00000585943 307 ntBASIC1.25□□□□□ -2.21
UPK2O00526 HMGN1P30-201ENST00000589286 268 ntBASIC1.25□□□□□ -2.21
UPK2O00526 RNU6-87P-201ENST00000607561 108 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AC104073.3-201ENST00000610942 955 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AC092140.2-201ENST00000618027 521 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AC019226.2-201ENST00000625973 424 ntBASIC1.25□□□□□ -2.21
UPK2O00526 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
UPK2O00526 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UPK2O00526 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UPK2O00526 Y_RNA.22-201ENST00000362492 102 ntBASIC1.24□□□□□ -2.21
UPK2O00526 RNU6-501P-201ENST00000364072 100 ntBASIC1.24□□□□□ -2.21
UPK2O00526 RNA5SP126-201ENST00000365092 109 ntBASIC1.24□□□□□ -2.21
UPK2O00526 RNU6-61P-201ENST00000365528 109 ntBASIC1.24□□□□□ -2.21
UPK2O00526 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
UPK2O00526 RNU6-338P-201ENST00000383888 105 ntBASIC1.24□□□□□ -2.21
UPK2O00526 RNU6-997P-201ENST00000384725 107 ntBASIC1.24□□□□□ -2.21
UPK2O00526 MIR544A-201ENST00000384855 91 ntBASIC1.24□□□□□ -2.21
UPK2O00526 MIR558-201ENST00000384920 94 ntBASIC1.24□□□□□ -2.21
UPK2O00526 MIR504-201ENST00000385065 83 ntBASIC1.24□□□□□ -2.21
UPK2O00526 MIR30A-201ENST00000385092 71 ntBASIC1.24□□□□□ -2.21
UPK2O00526 MRPL42P2-201ENST00000403169 426 ntBASIC1.24□□□□□ -2.21
UPK2O00526 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.24□□□□□ -2.21
UPK2O00526 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.24□□□□□ -2.21
UPK2O00526 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms