Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-606P-201ENST00000384721 111 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-550P-201ENST00000391057 101 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-1158P-201ENST00000391167 107 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORA40.18-201ENST00000391200 128 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 CISD1P1-201ENST00000393907 327 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 CALM2P3-201ENST00000400429 449 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 MTCO3P41-201ENST00000414801 328 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL353729.1-201ENST00000425044 720 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC098614.2-201ENST00000426040 255 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 MTCO2P7-201ENST00000446518 666 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RPL7P12-201ENST00000446719 750 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 PSPHP1-201ENST00000450062 261 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RPL26P9-201ENST00000457466 433 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC104564.1-201ENST00000493028 407 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC023194.1-201ENST00000493084 308 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC091435.1-201ENST00000505442 584 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-1183P-201ENST00000517054 60 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC022634.1-201ENST00000520765 532 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP003392.2-201ENST00000527269 208 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 OR5AL2P-201ENST00000532185 920 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC021739.1-201ENST00000559631 174 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC008752.3-201ENST00000588113 712 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 DEFB131E-202ENST00000602581 683 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC009314.1-201ENST00000603871 304 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL359547.2-201ENST00000615810 418 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 ADAM3A-203ENST00000461344 2157 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-1120P-201ENST00000362988 108 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-623P-201ENST00000363143 105 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-1029P-201ENST00000384109 107 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU2-9P-201ENST00000410194 145 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-1025P-201ENST00000410629 104 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC027124.2-201ENST00000428249 105 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL669831.1-202ENST00000428504 417 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 RPS15AP5-201ENST00000436276 388 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 GTF2IP13-201ENST00000438487 386 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL356010.1-201ENST00000456364 102 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU7-26P-201ENST00000458980 63 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 RPS3AP17-201ENST00000472594 777 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 FAM92A1P2-202ENST00000504766 877 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC112206.3-201ENST00000514578 389 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC135279.1-201ENST00000543493 504 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 ADI1P3-201ENST00000549509 470 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 OR11H5P-201ENST00000554039 926 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC110588.1-201ENST00000559699 137 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 MTATP6P3-201ENST00000581686 676 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC073539.2-201ENST00000597113 165 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC092954.2-201ENST00000609103 430 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 HMGB1P24-202ENST00000615653 685 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR6134-201ENST00000617606 109 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC005609.4-201ENST00000625071 447 ntBASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
TMX2-CTNND1H3BSU7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.1-201ENST00000352915 104 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.33-201ENST00000362591 102 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU1-17P-201ENST00000363022 152 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.381-201ENST00000365666 102 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU5A-6P-201ENST00000384136 116 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 Y_RNA.517-201ENST00000384551 106 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR301A-201ENST00000385261 86 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-750P-201ENST00000390946 107 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORD23.1-201ENST00000408212 104 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU2-3P-201ENST00000410144 191 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU2-49P-201ENST00000410666 184 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-1328P-201ENST00000410938 106 ntBASIC1.87□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNA5SP489-201ENST00000410986 109 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms