Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.63□□□□□ -1.67
H3BM21 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.63□□□□□ -1.67
H3BM21 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H3BM21 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3BM21 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
H3BM21 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3BM21 AC126755.2-208ENST00000327792 462 ntBASIC4.62□□□□□ -1.67
H3BM21 AC138969.1-213ENST00000331436 462 ntBASIC4.62□□□□□ -1.67
H3BM21 RNU6-527P-201ENST00000363425 104 ntBASIC4.62□□□□□ -1.67
H3BM21 SNORA70.2-201ENST00000364506 135 ntBASIC4.62□□□□□ -1.67
H3BM21 RNU6-166P-201ENST00000384371 107 ntBASIC4.62□□□□□ -1.67
H3BM21 SNORA40C-201ENST00000391285 128 ntBASIC4.62□□□□□ -1.67
H3BM21 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.62□□□□□ -1.67
H3BM21 RPL21P17-201ENST00000397467 475 ntBASIC4.62□□□□□ -1.67
H3BM21 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3BM21 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.62□□□□□ -1.67
H3BM21 AC007560.1-201ENST00000426912 237 ntBASIC4.62□□□□□ -1.67
H3BM21 AC008065.1-201ENST00000428525 348 ntBASIC4.62□□□□□ -1.67
H3BM21 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3BM21 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.62□□□□□ -1.67
H3BM21 BX276092.4-201ENST00000452056 248 ntBASIC4.62□□□□□ -1.67
H3BM21 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.62□□□□□ -1.67
H3BM21 RN7SKP277-201ENST00000516895 283 ntBASIC4.62□□□□□ -1.67
H3BM21 PARP1P2-201ENST00000556806 195 ntBASIC4.62□□□□□ -1.67
H3BM21 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.62□□□□□ -1.67
H3BM21 AP005019.3-201ENST00000620418 560 ntBASIC4.62□□□□□ -1.67
H3BM21 U3.53-201ENST00000628922 216 ntBASIC4.62□□□□□ -1.67
H3BM21 SNORA43.4-201ENST00000629559 138 ntBASIC4.62□□□□□ -1.67
H3BM21 MAPK10-320ENST00000641462 6696 ntBASIC4.62□□□□□ -1.67
H3BM21 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.62□□□□□ -1.67
H3BM21 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3BM21 AC087190.4-201ENST00000574616 8334 ntBASIC4.62□□□□□ -1.67
H3BM21 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
H3BM21 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
H3BM21 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
H3BM21 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H3BM21 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.61□□□□□ -1.67
H3BM21 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
H3BM21 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H3BM21 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H3BM21 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
H3BM21 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.61□□□□□ -1.67
H3BM21 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
H3BM21 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.61□□□□□ -1.67
H3BM21 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H3BM21 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
H3BM21 Y_RNA.85-201ENST00000363014 111 ntBASIC4.61□□□□□ -1.67
H3BM21 RNU6-1205P-201ENST00000363625 106 ntBASIC4.61□□□□□ -1.67
H3BM21 RNU5F-3P-201ENST00000363767 117 ntBASIC4.61□□□□□ -1.67
H3BM21 Y_RNA.179-201ENST00000363844 90 ntBASIC4.61□□□□□ -1.67
H3BM21 AL512633.1-201ENST00000399931 655 ntBASIC4.61□□□□□ -1.67
H3BM21 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.61□□□□□ -1.67
H3BM21 AC096649.2-201ENST00000416186 393 ntBASIC4.61□□□□□ -1.67
H3BM21 AC074117.2-201ENST00000417130 397 ntBASIC4.61□□□□□ -1.67
H3BM21 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.61□□□□□ -1.67
H3BM21 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.61□□□□□ -1.67
H3BM21 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.61□□□□□ -1.67
H3BM21 FABP5P15-201ENST00000453566 214 ntBASIC4.61□□□□□ -1.67
H3BM21 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.61□□□□□ -1.67
H3BM21 SNORD116-26-201ENST00000516006 96 ntBASIC4.61□□□□□ -1.67
H3BM21 RNA5SP464-201ENST00000516251 108 ntBASIC4.61□□□□□ -1.67
H3BM21 RNA5SP395-201ENST00000516567 118 ntBASIC4.61□□□□□ -1.67
H3BM21 RNU2-12P-201ENST00000517216 168 ntBASIC4.61□□□□□ -1.67
H3BM21 TOMM20P2-201ENST00000540082 421 ntBASIC4.61□□□□□ -1.67
H3BM21 AC016256.1-201ENST00000547971 354 ntBASIC4.61□□□□□ -1.67
H3BM21 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.61□□□□□ -1.67
H3BM21 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.61□□□□□ -1.67
H3BM21 AL031274.2-201ENST00000599419 203 ntBASIC4.61□□□□□ -1.67
H3BM21 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
H3BM21 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.61□□□□□ -1.67
H3BM21 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H3BM21 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
H3BM21 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.61□□□□□ -1.67
H3BM21 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.61□□□□□ -1.67
H3BM21 AC139713.2-214ENST00000642059 1811 ntBASIC4.6□□□□□ -1.67
H3BM21 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
H3BM21 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
H3BM21 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
H3BM21 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
H3BM21 RNA5SP447-201ENST00000363749 119 ntBASIC4.6□□□□□ -1.67
H3BM21 Y_RNA.544-201ENST00000384650 113 ntBASIC4.6□□□□□ -1.67
H3BM21 RNA5SP56-201ENST00000410277 118 ntBASIC4.6□□□□□ -1.67
H3BM21 RNA5SP475-201ENST00000410568 110 ntBASIC4.6□□□□□ -1.67
H3BM21 RPL31P13-201ENST00000484151 370 ntBASIC4.6□□□□□ -1.67
H3BM21 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.6□□□□□ -1.67
H3BM21 AP001781.1-201ENST00000530977 207 ntBASIC4.6□□□□□ -1.67
H3BM21 MIR378D2-201ENST00000580636 98 ntBASIC4.6□□□□□ -1.67
H3BM21 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.6□□□□□ -1.67
H3BM21 MIR8069-1-201ENST00000616627 86 ntBASIC4.6□□□□□ -1.67
H3BM21 MIR8069-2-201ENST00000621412 86 ntBASIC4.6□□□□□ -1.67
H3BM21 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
H3BM21 AC116096.1-201ENST00000566804 2314 ntBASIC4.6□□□□□ -1.67
H3BM21 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
H3BM21 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
H3BM21 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.59□□□□□ -1.67
H3BM21 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
H3BM21 DHX9P1-201ENST00000436565 3076 ntBASIC4.59□□□□□ -1.67
H3BM21 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
H3BM21 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
H3BM21 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms