Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 UBL5P3-201ENST00000475112 231 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RPL7P43-201ENST00000478876 753 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RPL23AP70-201ENST00000483361 460 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 HMGB1P30-201ENST00000492455 606 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-506P-201ENST00000516553 94 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC090616.3-201ENST00000582184 217 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC008121.1-201ENST00000603244 268 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RMST_7.1-201ENST00000621935 268 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AL031601.2-202ENST00000622650 282 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.28□□□□□ -2.05
NEDD8-MDP1E9PL57 AC080100.1-201ENST00000624239 5356 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-1085P-201ENST00000363576 107 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-461P-201ENST00000364195 107 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 SNORA69-201ENST00000383895 132 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 SNORA64-201ENST00000384674 134 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 SNORA80E-201ENST00000384744 137 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR144-201ENST00000384886 86 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-261P-201ENST00000459506 102 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 MRPL42P6-201ENST00000486397 371 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.687-201ENST00000516558 91 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 BTF3P12-201ENST00000519620 469 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AK6P1-201ENST00000540219 478 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC103810.1-201ENST00000579873 453 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC025165.5-201ENST00000602802 578 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC093788.1-201ENST00000609356 927 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AL137847.3-201ENST00000611521 109 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 uc_338.14-201ENST00000613162 166 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR6895-201ENST00000613497 78 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 MIR6132-201ENST00000622083 109 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC022418.1-201ENST00000624118 445 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC138627.2-201ENST00000624202 601 ntBASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
NEDD8-MDP1E9PL57 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.399-201ENST00000383955 105 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-1083P-201ENST00000384022 107 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.481-201ENST00000384373 102 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-434P-201ENST00000384376 107 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 RNU6-748P-201ENST00000384648 107 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 MICF-203ENST00000432679 129 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AP001324.2-201ENST00000461163 319 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 CCDC34P1-201ENST00000507441 517 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AC107222.1-201ENST00000510899 637 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AC016957.1-201ENST00000534895 309 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 CR383656.8-201ENST00000549046 145 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 BNIP3P6-201ENST00000549284 499 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL138976.2-201ENST00000563989 694 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL158827.2-201ENST00000602494 330 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL670379.10-201ENST00000604330 253 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL670379.9-201ENST00000605428 253 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AP003400.5-201ENST00000624827 617 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL691447.3-201ENST00000635020 330 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 AL109809.4-201ENST00000603520 2185 ntBASIC2.26□□□□□ -2.05
NEDD8-MDP1E9PL57 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 AP006437.1-201ENST00000641440 3685 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 AC010329.5-201ENST00000623497 2174 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.324-201ENST00000365165 102 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.372-201ENST00000365599 102 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 SNORA67.3-201ENST00000384366 140 ntBASIC2.25□□□□□ -2.05
NEDD8-MDP1E9PL57 Y_RNA.516-201ENST00000384541 124 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms