Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU6-1188P-201ENST00000363795 107 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-336P-201ENST00000364891 107 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 SNORA9.2-201ENST00000365361 133 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-596P-201ENST00000365395 98 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-750P-201ENST00000390946 107 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 MTCYBP4-201ENST00000401524 249 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-325P-201ENST00000411132 105 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AF228730.4-201ENST00000421457 183 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 DAP3P1-201ENST00000441522 278 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 RNU7-152P-201ENST00000458982 64 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC003982.1-202ENST00000469928 248 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC103975.1-201ENST00000482506 483 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AK3P2-201ENST00000507976 429 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.718-201ENST00000517110 102 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 IGKV2-23-201ENST00000518729 323 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC025281.1-201ENST00000567026 265 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC009163.5-201ENST00000575421 637 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC020895.1-201ENST00000595362 272 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 SRGNP1-201ENST00000603392 451 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC091152.3-201ENST00000604227 325 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC018462.2-201ENST00000605375 395 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC019193.3-201ENST00000609144 554 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 MIR6075-201ENST00000620782 95 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AC022140.2-201ENST00000623500 188 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 HAUS6P2-201ENST00000433254 2404 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.9□□□□□ -1.95
TCRBV7S3A2A0A539 AL161431.1-201ENST00000618966 4205 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 DYNLT3P1-201ENST00000378574 347 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 MIR517A-201ENST00000385001 87 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 RNA5SP171-201ENST00000391071 115 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 RN7SKP123-201ENST00000410732 291 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-370P-201ENST00000411008 104 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 MTCO2P27-201ENST00000420740 428 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AC092017.2-201ENST00000427600 362 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AL513043.1-201ENST00000439124 535 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 RPL9P9-202ENST00000466501 579 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 RPL27AP5-201ENST00000469428 449 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 HMGN1P13-201ENST00000505795 138 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AC002456.2-201ENST00000509356 380 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 PTP4A1P4-201ENST00000512479 322 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 ACA59.2-201ENST00000517061 156 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AC091564.4-201ENST00000533934 2194 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 MIR5690-201ENST00000583739 73 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 MIR4506-201ENST00000584693 77 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 BNIP3P16-201ENST00000589779 534 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AL133255.1-201ENST00000606374 441 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 AC090574.1-201ENST00000623186 233 ntBASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TCRBV7S3A2A0A539 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC004944.1-201ENST00000517807 3059 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-799P-201ENST00000363567 107 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.259-201ENST00000364619 101 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.315-201ENST00000365117 102 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-487P-201ENST00000365430 104 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-843P-201ENST00000384454 104 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RNY4P36-201ENST00000391116 96 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-1050P-201ENST00000410388 107 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC074117.2-201ENST00000417130 397 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AL133396.1-201ENST00000432048 687 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC133134.1-201ENST00000466800 359 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 MED28P2-201ENST00000475771 317 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC018437.1-201ENST00000492214 406 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC091826.1-201ENST00000514065 313 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RNA5SP385-201ENST00000515947 110 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.708-201ENST00000516950 96 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC010186.2-204ENST00000537668 439 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 DNAJC8P1-201ENST00000554535 372 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AP000654.2-201ENST00000605633 586 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC084757.4-201ENST00000616350 526 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms