Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC090255.1-201ENST00000495779 349 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AC108210.2-201ENST00000503681 201 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 Y_RNA.687-201ENST00000516558 91 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 RNA5SP503-201ENST00000517047 117 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 FAM92A1P1-201ENST00000528023 890 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AP005435.4-201ENST00000529514 284 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AC010186.2-204ENST00000537668 439 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 MIR4765-201ENST00000585007 77 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AC008752.3-201ENST00000588113 712 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AC068790.2-201ENST00000602601 557 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AC073648.5-201ENST00000603502 305 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 uc_338.14-201ENST00000613162 166 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 MIR7157-201ENST00000635801 60 ntBASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.03□□□□□ -2.08
SMIM28A0A1B0GU29 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AP006437.1-201ENST00000641440 3685 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-715P-201ENST00000365204 103 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 Y_RNA.381-201ENST00000365666 102 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 CYCSP33-201ENST00000414485 327 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AL353193.1-201ENST00000421444 268 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 MTCO2P19-201ENST00000427513 598 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AL451074.3-201ENST00000437709 472 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 MTND1P18-201ENST00000448191 573 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 RNU7-182P-201ENST00000459009 62 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 MED28P2-201ENST00000475771 317 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AC091133.4-201ENST00000511142 308 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 SCARNA3-201ENST00000517097 143 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 MIR5583-1-201ENST00000580941 59 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AC105245.1-201ENST00000581934 244 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 MIR4769-201ENST00000584126 77 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AL670379.10-201ENST00000604330 253 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AL670379.9-201ENST00000605428 253 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 RMST_4.1-201ENST00000616886 107 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 AC092656.1-203ENST00000624134 423 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 SEPT14P19-203ENST00000633205 211 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 U6.114-201ENST00000636407 96 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.02□□□□□ -2.09
SMIM28A0A1B0GU29 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-1287P-201ENST00000362914 107 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-1060P-201ENST00000384664 107 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 MTATP6P18-201ENST00000417994 673 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 USP9YP27-201ENST00000418455 438 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 USP9YP14-201ENST00000430663 563 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 RPL7P54-201ENST00000438336 674 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 AC006512.1-201ENST00000468816 291 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 RPL23AP63-201ENST00000498752 471 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 AC108078.1-201ENST00000508073 725 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 HMGB3P3-201ENST00000510526 400 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-237P-201ENST00000515985 71 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 BNIP3P30-201ENST00000601184 574 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 AC245884.12-201ENST00000615364 59 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 AC024581.2-201ENST00000619986 252 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 RBBP8P1-201ENST00000449447 1844 ntBASIC2.01□□□□□ -2.09
SMIM28A0A1B0GU29 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 MTND5P30-201ENST00000452896 1731 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 RNA5SP125-201ENST00000364843 120 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-45P-201ENST00000384471 107 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-606P-201ENST00000384721 111 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 MIR9-3-201ENST00000385084 90 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-607P-201ENST00000411283 108 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 BTF3L4P1-201ENST00000413813 468 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 AC112771.1-201ENST00000463581 102 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 AC107393.1-201ENST00000512403 346 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 RN7SKP298-201ENST00000515950 94 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 MIR892C-201ENST00000516410 77 ntBASIC2□□□□□ -2.09
SMIM28A0A1B0GU29 RNU6-1178P-201ENST00000516674 107 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms