Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC080128.1-201ENST00000474389 1917 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 CDC27P3-201ENST00000635418 1910 ntBASIC1.62□□□□□ -2.15
TRAV40A0A0B4J280 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 RNA5SP138-201ENST00000365098 114 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1280P-201ENST00000365211 107 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 Y_RNA.372-201ENST00000365599 102 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-903P-201ENST00000391270 109 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 RNU2-16P-201ENST00000410712 136 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 HMGB1P9-201ENST00000429856 646 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AL596276.1-201ENST00000434465 418 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 USP9YP8-201ENST00000441913 500 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC087884.1-201ENST00000469738 328 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 RNA5SP364-201ENST00000516938 78 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 SUB1P1-201ENST00000524415 382 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AK6P1-201ENST00000540219 478 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC015712.3-201ENST00000559380 164 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC011494.1-201ENST00000596454 237 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC068790.2-201ENST00000602601 557 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC009314.1-201ENST00000603871 304 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AL355598.1-201ENST00000604169 202 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC123912.5-201ENST00000605470 343 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AC104073.3-201ENST00000610942 955 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 MIR6845-201ENST00000613182 61 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AP001486.3-201ENST00000615334 372 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AL354950.2-201ENST00000617939 290 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 SEPT14P19-203ENST00000633205 211 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 OR5AK4P-201ENST00000635912 903 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 U6.114-201ENST00000636407 96 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 Z82209.1-201ENST00000422141 2135 ntBASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV40A0A0B4J280 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-552P-201ENST00000362869 119 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1120P-201ENST00000362988 108 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-45P-201ENST00000384471 107 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1127P-201ENST00000384580 107 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-1072P-201ENST00000384703 107 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-443P-201ENST00000384780 107 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 U8.13-201ENST00000390842 128 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 SNORD70.1-201ENST00000391007 85 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 RPL7P54-201ENST00000438336 674 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC073415.1-201ENST00000449240 153 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 MRPL42P6-201ENST00000486397 371 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 RNU5F-8P-201ENST00000515941 111 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 Y_RNA.704-201ENST00000516851 102 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 NACAP3-201ENST00000552100 481 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC007151.1-201ENST00000572774 483 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 MIR3117-201ENST00000584034 78 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC002984.1-201ENST00000591692 448 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC019159.1-201ENST00000605094 187 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC139792.3-201ENST00000623525 224 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 AC099654.7-201ENST00000635788 2127 ntBASIC1.6□□□□□ -2.15
TRAV40A0A0B4J280 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 RNU5A-6P-201ENST00000384136 116 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-72P-201ENST00000384285 79 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 SNORD116-4-201ENST00000384733 96 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 MIR627-201ENST00000384979 97 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 RNU6-220P-201ENST00000390919 107 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 AL353621.1-201ENST00000418219 243 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 HMGN2P38-201ENST00000423806 265 ntBASIC1.59□□□□□ -2.15
TRAV40A0A0B4J280 RPL30P4-201ENST00000429309 333 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms