Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MIR181B1-201ENST00000385240 110 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 RNA5SP354-201ENST00000391247 136 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 AL139095.1-201ENST00000404326 391 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 RNU6-1025P-201ENST00000410629 104 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 MTND3P23-201ENST00000431980 347 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 SNRPEP9-201ENST00000436794 238 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 UBBP3-201ENST00000445497 241 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 SNORD109B-201ENST00000458961 67 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 SNORD109A-201ENST00000459128 67 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 MTND3P22-201ENST00000510932 243 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 RNU6-277P-201ENST00000516272 106 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 RNA5SP291-201ENST00000517222 105 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 AC105029.1-201ENST00000520250 669 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 AC025755.1-201ENST00000521306 278 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 MIR5692A1-201ENST00000580523 69 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 AC005046.1-201ENST00000608515 625 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 AL161431.1-201ENST00000618966 4205 ntBASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
SNX9Q9Y5X1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RNU6-1252P-201ENST00000363054 104 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 SNORD113-7-201ENST00000363762 77 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 SNORD56.5-201ENST00000364281 72 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 Y_RNA.339-201ENST00000365325 102 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RNU6-395P-201ENST00000365662 106 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RNU2-52P-201ENST00000410680 190 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RNA5SP492-201ENST00000411330 114 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AL513477.1-202ENST00000417061 214 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AL365496.1-201ENST00000426885 215 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC112220.1-201ENST00000434628 355 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 HMGB1P18-201ENST00000438801 619 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC093019.1-201ENST00000443135 252 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RPL12P25-201ENST00000455592 494 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RNU7-23P-201ENST00000459465 62 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 SNORA9.3-201ENST00000516383 129 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RNU6-928P-201ENST00000516876 104 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RNU6-703P-201ENST00000516946 107 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC026241.1-201ENST00000517873 2142 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 CYCSP27-201ENST00000527643 293 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 MIR3605-201ENST00000583214 100 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC002044.1-201ENST00000606707 158 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AC093913.1-201ENST00000614178 329 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 RMST_4.1-201ENST00000616886 107 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 AL031601.2-202ENST00000622650 282 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 TPTEP1-208ENST00000636884 213 ntBASIC2.91□□□□□ -1.94
SNX9Q9Y5X1 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 RNU4-73P-201ENST00000363164 141 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.135-201ENST00000363439 95 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.212-201ENST00000364177 102 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 RNU6-1179P-201ENST00000384667 107 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 MIR9-1-201ENST00000385198 89 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 SNORA40C-201ENST00000391285 128 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC108938.1-201ENST00000451204 136 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC233279.1-201ENST00000455300 423 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC090525.1-201ENST00000479116 478 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC011005.2-201ENST00000487324 359 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AP000889.2-201ENST00000532684 490 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 MIR3941-201ENST00000582572 103 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC023043.3-201ENST00000593113 385 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 AC087045.1-201ENST00000605856 382 ntBASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SNX9Q9Y5X1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AC062016.1-201ENST00000355719 319 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 RNU6-778P-201ENST00000363269 103 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 RNU6-266P-201ENST00000364225 107 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 Y_RNA.356-201ENST00000365475 113 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 MT-TD-201ENST00000387419 68 ntBASIC2.89□□□□□ -1.95
SNX9Q9Y5X1 AL512633.1-201ENST00000399931 655 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms