Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 AC091152.2-201ENST00000591628 2569 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 RNU6-198P-201ENST00000384258 104 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 RPS29P13-201ENST00000402041 169 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 AL356057.3-201ENST00000402607 340 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 ARF4P2-201ENST00000430209 526 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 AL133396.1-201ENST00000432048 687 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 AL137792.2-201ENST00000443484 235 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 AL136097.1-201ENST00000456945 913 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 RPL23AP67-201ENST00000465341 474 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 RPS29P20-201ENST00000489592 171 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 SMURF2P1-201ENST00000514992 481 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 AP000867.2-201ENST00000532468 320 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 SNRPGP18-201ENST00000553000 214 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 MIR4474-201ENST00000579189 78 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 MIR4425-201ENST00000580572 84 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 U4.6-201ENST00000621618 127 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 ADAM3A-203ENST00000461344 2157 ntBASIC3.46□□□□□ -1.86
PCDHB1Q9Y5F3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 Y_RNA.144-201ENST00000363521 113 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 Y_RNA.145-201ENST00000363527 102 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 Y_RNA.148-201ENST00000363557 117 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 RNU6-1317P-201ENST00000364582 104 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 SNORA75.6-201ENST00000391318 127 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 Y_RNA.605-201ENST00000410577 105 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 AL160004.2-201ENST00000432935 350 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 SETP5-201ENST00000437270 562 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 HMGN2P20-201ENST00000437531 273 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 FTH1P25-201ENST00000447665 469 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 U3.44-201ENST00000458938 192 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 RPL7P42-201ENST00000481005 679 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 MIR5047-201ENST00000579212 100 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 MIR4273-201ENST00000582824 84 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 AC012493.2-201ENST00000595083 291 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 AC005046.1-201ENST00000608515 625 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 AC058791.1-201ENST00000608412 3198 ntBASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.45□□□□□ -1.86
PCDHB1Q9Y5F3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 RNU6-942P-201ENST00000363002 107 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 RNU6-527P-201ENST00000363425 104 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 RNU1-100P-201ENST00000365255 165 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 Y_RNA.404-201ENST00000383978 102 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 MIR591-201ENST00000385290 95 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 RN7SKP111-201ENST00000410349 271 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AL591043.1-201ENST00000432461 424 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AC116655.1-201ENST00000508324 901 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 RNU6-120P-201ENST00000516077 103 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 RNU6-976P-201ENST00000516086 111 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AC022634.1-201ENST00000520765 532 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AP005902.1-201ENST00000521358 186 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 CR383656.8-201ENST00000549046 145 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 HMGN2P15-201ENST00000585707 270 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 AC006557.5-201ENST00000603126 811 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 YPEL5P2-201ENST00000605553 359 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 MIR8076-201ENST00000611401 83 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 PLCE1P1-201ENST00000622094 305 ntBASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.44□□□□□ -1.86
PCDHB1Q9Y5F3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHB1Q9Y5F3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHB1Q9Y5F3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.43□□□□□ -1.86
PCDHB1Q9Y5F3 Y_RNA.5-201ENST00000362334 102 ntBASIC3.43□□□□□ -1.86
PCDHB1Q9Y5F3 Y_RNA.28-201ENST00000362554 111 ntBASIC3.43□□□□□ -1.86
PCDHB1Q9Y5F3 RNU6-428P-201ENST00000362942 107 ntBASIC3.43□□□□□ -1.86
PCDHB1Q9Y5F3 U8.8-201ENST00000365399 135 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms