Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RPS15AP5-201ENST00000436276 388 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RPS4XP11-201ENST00000446897 772 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 FABP5P15-201ENST00000453566 214 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RPL37P6-201ENST00000460682 294 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC105313.1-201ENST00000509121 353 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RNA5SP220-201ENST00000516298 104 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RNU6-677P-201ENST00000516914 101 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RNA5SP337-201ENST00000517007 109 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 COX6CP5-201ENST00000527162 228 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 OR5AQ1P-201ENST00000527596 927 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 MTCYBP33-201ENST00000575007 1130 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 MIR548AB-201ENST00000584917 84 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RSL24D1P11-201ENST00000591045 491 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 BNIP3P9-201ENST00000603714 553 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AL451064.1-201ENST00000607718 471 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC004908.3-201ENST00000610248 625 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC008250.2-201ENST00000615261 205 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RNU6-623P-201ENST00000363143 105 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RNU6-61P-201ENST00000365528 109 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 Y_RNA.534-201ENST00000384599 112 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RNA5SP354-201ENST00000391247 136 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC127391.1-201ENST00000411737 98 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AL358075.3-201ENST00000426289 226 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC007560.1-201ENST00000426912 237 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC132479.1-201ENST00000449160 144 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC007395.1-201ENST00000451333 677 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AMD1P1-201ENST00000457220 922 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 RNU6-143P-201ENST00000516942 93 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC104581.2-201ENST00000572227 430 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC068790.2-201ENST00000602601 557 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 DUXAP4-201ENST00000603046 613 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AL355598.1-201ENST00000604169 202 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AC007363.1-201ENST00000604736 620 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 uc_338.14-201ENST00000613162 166 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 AL133173.2-201ENST00000614270 90 ntBASIC1.54□□□□□ -2.16
SHANK1Q9Y566 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SHANK1Q9Y566 HAUS6P2-201ENST00000433254 2404 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 Y_RNA.22-201ENST00000362492 102 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-942P-201ENST00000363002 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 Y_RNA.224-201ENST00000364308 111 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNY4P34-201ENST00000364779 95 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 Y_RNA.296-201ENST00000364930 108 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 Z98749.2-208ENST00000381646 500 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-1-201ENST00000383898 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-1029P-201ENST00000384109 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-42P-201ENST00000384165 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-36P-201ENST00000384172 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-4P-201ENST00000384205 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-5P-201ENST00000384238 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-3P-201ENST00000384314 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-2-201ENST00000384627 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-9-201ENST00000384776 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-33P-201ENST00000384793 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AL139397.2-201ENST00000404529 772 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 NDUFS5P1-201ENST00000405668 289 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK1Q9Y566 SUMO1P4-201ENST00000429430 302 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK1Q9Y566 MTATP6P16-201ENST00000434543 526 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC009296.1-201ENST00000443146 155 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AL137159.1-201ENST00000452808 512 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC080013.2-201ENST00000460866 323 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC021739.1-201ENST00000559631 174 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC008739.2-201ENST00000597006 317 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 RNU6-6P-201ENST00000606623 107 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AL139286.2-201ENST00000606838 396 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AP002360.4-201ENST00000606980 481 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 uc_338.5-201ENST00000611839 155 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 AC009509.4-201ENST00000619202 509 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 MTND5P42-201ENST00000637720 498 ntBASIC1.53□□□□□ -2.16
SHANK1Q9Y566 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.53□□□□□ -2.16
SHANK1Q9Y566 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 MIR412-201ENST00000362142 91 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.367-201ENST00000365544 101 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AL031779.1-201ENST00000415663 330 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 TIMM9P3-201ENST00000428659 274 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 MTND4P32-201ENST00000437189 1237 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 RPS15AP27-201ENST00000449183 343 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC117522.1-201ENST00000509821 380 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms