Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 MIR424-201ENST00000362227 98 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-23P-201ENST00000363283 107 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-1179P-201ENST00000384667 107 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-997P-201ENST00000384725 107 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 Y_RNA.597-201ENST00000410463 100 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 RNA5SP100-201ENST00000410903 110 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 RNA5SP59-201ENST00000410922 110 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 HMGB1P18-201ENST00000438801 619 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AP000797.1-201ENST00000478870 387 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 EEF1A1P37-201ENST00000522748 715 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 MIR4422-201ENST00000581938 83 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AL158032.1-201ENST00000605401 106 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AC068944.2-201ENST00000610373 403 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 MIR8081-201ENST00000611533 95 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 MIR8074-201ENST00000615081 81 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 AC130454.1-201ENST00000622948 401 ntBASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.46□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-83P-201ENST00000384568 112 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 RPS3AP36-201ENST00000398190 775 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AL357139.1-201ENST00000407792 426 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 MTND1P20-201ENST00000430341 950 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AC132942.1-201ENST00000486753 483 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AC115990.1-201ENST00000526957 301 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 BNIP3P6-201ENST00000549284 499 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 MIR3945-201ENST00000581853 98 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 MIR6845-201ENST00000613182 61 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AC026585.1-201ENST00000619582 524 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 OR4G3P-201ENST00000633500 913 ntBASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
RHBDD3Q9Y3P4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 snoU2_19.1-201ENST00000362361 80 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 SNORD56.1-201ENST00000362913 68 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 CISD1P1-201ENST00000393907 327 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 OOSP1P1-201ENST00000423265 274 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AL357134.1-201ENST00000445848 426 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AL513124.1-201ENST00000450410 614 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 BZW1P2-201ENST00000473537 826 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AC025465.3-201ENST00000510570 311 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 RNU5A-4P-201ENST00000516588 111 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-250P-201ENST00000516958 103 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 RNA5SP337-201ENST00000517007 109 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AC090888.2-201ENST00000559765 1144 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 MIR5697-201ENST00000578045 78 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 MIR5692A1-201ENST00000580523 69 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AC005786.1-201ENST00000588553 154 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AC092106.3-201ENST00000611308 722 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 AL031667.3-201ENST00000620124 655 ntBASIC1.44□□□□□ -2.18
RHBDD3Q9Y3P4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-743P-201ENST00000364151 106 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-384P-201ENST00000364900 104 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-809P-201ENST00000384461 107 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 HMGB1P31-201ENST00000437242 427 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 MTCO1P44-201ENST00000441935 243 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 AC118469.1-201ENST00000442943 488 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 GDI2P2-201ENST00000445131 608 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 AC114801.2-201ENST00000503825 781 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 YWHAEP4-201ENST00000505390 198 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 AC096745.1-201ENST00000509945 370 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 RNU6-295P-201ENST00000516901 104 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 COPS8P3-201ENST00000526024 482 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 MTND4LP18-201ENST00000526864 291 ntBASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.43□□□□□ -2.18
RHBDD3Q9Y3P4 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms