Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AC135279.1-201ENST00000543493 504 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 ADI1P3-201ENST00000549509 470 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.2□□□□□ -2.06
SMC3Q9UQE7 MIR4528-201ENST00000577763 90 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 Z84480.1-201ENST00000605131 311 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AC126118.1-201ENST00000607744 628 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AC245008.1-201ENST00000608123 476 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AC108479.2-201ENST00000617314 601 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 AC093648.1-201ENST00000623546 606 ntBASIC2.2□□□□□ -2.06
SMC3Q9UQE7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
SMC3Q9UQE7 Y_RNA.51-201ENST00000362725 102 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 SNORA16.1-201ENST00000364597 132 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SMC3Q9UQE7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SMC3Q9UQE7 RNU6-641P-201ENST00000384006 107 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 MIR558-201ENST00000384920 94 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 MIR518D-201ENST00000385014 87 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 CISD1P1-201ENST00000393907 327 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 RNU2-39P-201ENST00000410604 198 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AL031779.1-201ENST00000415663 330 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 MED13P1-201ENST00000428342 171 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AL353706.1-201ENST00000436728 494 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 CYP2C59P-201ENST00000457790 269 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC011005.2-201ENST00000487324 359 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 FAM92A1P2-202ENST00000504766 877 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC117522.1-201ENST00000509821 380 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC108078.2-201ENST00000510750 236 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC008549.1-201ENST00000512900 643 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 MTCO3P28-201ENST00000513351 515 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC090572.1-201ENST00000519251 160 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AL022154.1-201ENST00000604698 785 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AL355297.2-201ENST00000604792 129 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 RN7SKP299-201ENST00000606679 301 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 MIR98-201ENST00000606724 119 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AL139286.2-201ENST00000606838 396 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 RNU6-91P-201ENST00000607774 107 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC093783.1-201ENST00000612976 329 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC090582.1-201ENST00000636321 199 ntBASIC2.19□□□□□ -2.06
SMC3Q9UQE7 AC009487.4-201ENST00000624969 3585 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC092881.1-201ENST00000638218 2733 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 DLGAP5P1-201ENST00000430307 464 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC009238.1-201ENST00000442165 424 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 RPL23AP6-201ENST00000446637 472 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC009237.6-201ENST00000446969 424 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AL033528.1-201ENST00000453780 140 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AL162395.1-201ENST00000457882 422 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 RNU6-956P-201ENST00000458868 103 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 RPL7P43-201ENST00000478876 753 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 SNORA25.11-201ENST00000515935 105 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 RNU5B-3P-201ENST00000516601 115 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 RNA5SP137-201ENST00000516833 135 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC087045.1-201ENST00000605856 382 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC064859.1-201ENST00000624741 174 ntBASIC2.18□□□□□ -2.06
SMC3Q9UQE7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AL133475.1-201ENST00000404414 305 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 RNU2-9P-201ENST00000410194 145 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 C1DP2-201ENST00000418167 426 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 USP9YP14-201ENST00000430663 563 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AL451074.3-201ENST00000437709 472 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AL161788.1-201ENST00000441805 169 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 SNORD42A-201ENST00000459584 64 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AC112771.1-201ENST00000463581 102 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 RPL38P4-201ENST00000502376 214 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 MTND4P2-201ENST00000507767 1203 ntBASIC2.17□□□□□ -2.06
SMC3Q9UQE7 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.17□□□□□ -2.06
SMC3Q9UQE7 RPL23AP94-201ENST00000512518 302 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms