Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC146507.2-201ENST00000460608 476 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 MTND3P25-201ENST00000509243 135 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 MTND3P22-201ENST00000510932 243 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 TBCAP3-201ENST00000512475 312 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 LRRC37A5P-203ENST00000580181 585 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 AC243960.4-201ENST00000600532 288 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 CTHRC1P1-201ENST00000605383 469 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 FO393413.1-201ENST00000402892 195 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 AL139095.1-201ENST00000404326 391 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 TOMM20P4-201ENST00000427861 435 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 ARL5AP4-201ENST00000430731 512 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 NDUFB1P2-201ENST00000449477 176 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 EEF1B2P7-201ENST00000451177 676 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 MRPS36P2-201ENST00000512569 299 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 MIR892C-201ENST00000516410 77 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 AL645944.1-201ENST00000603857 493 ntBASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDK11AQ9UQ88 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 RNU6-1180P-201ENST00000364935 107 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 RPL21P75-201ENST00000396599 483 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 RPL21P28-201ENST00000401418 483 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 NDUFB4P5-201ENST00000415445 361 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 MYL8P-204ENST00000431574 518 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 RNU7-66P-201ENST00000459469 62 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 RPL21P39-201ENST00000463605 483 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 AC087190.1-201ENST00000484462 480 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 AC093591.1-201ENST00000491435 481 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 RPL21P16-201ENST00000495531 483 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 RNU6-864P-201ENST00000516256 108 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 RNU6-1069P-201ENST00000516612 133 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 AC009902.1-201ENST00000519351 183 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 NACAP3-201ENST00000552100 481 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 AC026464.5-201ENST00000562497 722 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 AL121757.2-201ENST00000611223 313 ntBASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.37□□□□□ -1.71
CDK11AQ9UQ88 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 RNU6-254P-201ENST00000363377 107 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 RNU6-266P-201ENST00000364225 107 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 RNU1-112P-201ENST00000364401 164 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 MIR450B-201ENST00000401182 78 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AC007560.1-201ENST00000426912 237 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AL627311.1-201ENST00000431514 115 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 RPS29P20-201ENST00000489592 171 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AC139453.3-201ENST00000493276 369 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AC026801.1-201ENST00000497178 464 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 RNU6-572P-201ENST00000516724 80 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AC087854.1-201ENST00000519706 414 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AP000889.2-201ENST00000532684 490 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AC021646.1-201ENST00000605469 484 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 RMST_4.1-201ENST00000616886 107 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 AC243829.7-201ENST00000633081 225 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 U2.21-201ENST00000637295 81 ntBASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDK11AQ9UQ88 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 AC110491.1-201ENST00000562191 2010 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 DYNLT3P1-201ENST00000378574 347 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 RNU1-73P-201ENST00000383971 164 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 SNORA40C-201ENST00000391285 128 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 AL356432.1-201ENST00000405809 419 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 Y_RNA.623-201ENST00000411128 95 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 AL078601.1-201ENST00000444542 271 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 RPS27AP10-201ENST00000496103 208 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 SNORA31.19-201ENST00000517079 126 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 AC007938.3-201ENST00000604965 623 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 AC002044.1-201ENST00000606707 158 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 TPTEP1-208ENST00000636884 213 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 U6.99-201ENST00000637524 83 ntBASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
CDK11AQ9UQ88 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 RNU6-1252P-201ENST00000363054 104 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 U3.6-201ENST00000363622 211 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 AC096649.2-201ENST00000416186 393 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 BPY2DP-201ENST00000422208 265 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 MTND3P23-201ENST00000431980 347 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 AC098831.1-201ENST00000440661 216 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 AL513328.1-201ENST00000446460 224 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 MTATP6P7-201ENST00000453315 681 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 AC011005.2-201ENST00000487324 359 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 MTCO1P29-201ENST00000496868 288 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms