Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 HSPA8P4-201ENST00000511877 1920 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 RNU6-858P-201ENST00000362436 107 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.464-201ENST00000384282 110 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 RNU6-1117P-201ENST00000384525 104 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 RNA5SP219-201ENST00000390940 113 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 RNU6-1154P-201ENST00000391001 104 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 PRRC2CP1-201ENST00000404428 159 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 U3.42-201ENST00000408746 214 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 AC096920.1-201ENST00000423991 241 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 RPS29P26-201ENST00000477483 171 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 AC008716.1-201ENST00000511084 513 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 TBCAP3-201ENST00000512475 312 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 AC091826.1-201ENST00000514065 313 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.662-201ENST00000516028 97 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 RNU7-200P-201ENST00000516105 62 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 MIR4319-201ENST00000577285 85 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 AC008521.1-201ENST00000587471 187 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 BX284668.6-201ENST00000606899 438 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 MIR1244-1-201ENST00000612829 85 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 MIR1244-3-201ENST00000635744 85 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 MIR1244-2-201ENST00000636449 85 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 MIR1244-4-202ENST00000636813 85 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 AL137003.2-201ENST00000606924 2538 ntBASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
NOTCH3Q9UM47 RNU6-1317P-201ENST00000364582 104 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 SNORD82-201ENST00000365530 70 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 SNORA24.1-201ENST00000384401 135 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 RNU6-933P-201ENST00000384424 107 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC239809.1-201ENST00000450470 217 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AP000926.1-201ENST00000479573 241 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC105758.1-201ENST00000506038 399 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.683-201ENST00000516508 93 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC109446.1-201ENST00000566172 220 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC007619.2-201ENST00000605743 379 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 SAGE4P-201ENST00000442271 3381 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC010733.2-201ENST00000589496 5702 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 ZNF72P-201ENST00000425869 1908 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AL079305.1-201ENST00000623159 3008 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 RNU6-701P-201ENST00000384059 107 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.480-201ENST00000384364 102 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 RNU6-1168P-201ENST00000390831 104 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 RNU2-25P-201ENST00000411041 191 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 RNA5SP184-201ENST00000411071 108 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 RPL36P19-201ENST00000430744 301 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AL138752.1-201ENST00000452964 351 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC108471.1-201ENST00000513977 287 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 MIR5188-201ENST00000583467 113 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC006023.2-201ENST00000609916 167 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC130454.1-201ENST00000622948 401 ntBASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
NOTCH3Q9UM47 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.234-201ENST00000364409 97 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.269-201ENST00000364685 89 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 Y_RNA.533-201ENST00000384596 114 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 MIR628-201ENST00000385229 95 ntBASIC2.42□□□□□ -2.02
NOTCH3Q9UM47 MIR613-201ENST00000385248 95 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms