Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.27-201ENST00000362540 103 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 U3.13-201ENST00000364804 214 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 RNU1-73P-201ENST00000383971 164 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 SNORA1.3-201ENST00000384676 136 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 RPL21P65-201ENST00000406094 466 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 RPL26P27-201ENST00000414397 437 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 ARL5AP4-201ENST00000430731 512 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 RNU7-87P-201ENST00000459343 62 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 RN7SL385P-201ENST00000468873 276 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.680-201ENST00000516441 93 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.706-201ENST00000516933 99 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 AC136624.4-201ENST00000573044 370 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 RPL23AP78-201ENST00000599928 470 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 MIR6076-201ENST00000617521 113 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 AC078938.1-201ENST00000620993 318 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 AC097372.5-201ENST00000623665 376 ntBASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
BRPF3Q9ULD4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
BRPF3Q9ULD4 AC009541.1-201ENST00000438279 2662 ntBASIC4.65□□□□□ -1.66
BRPF3Q9ULD4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.65□□□□□ -1.66
BRPF3Q9ULD4 Y_RNA.183-201ENST00000363882 113 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 RNU2-38P-201ENST00000410856 79 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 RNU6-130P-201ENST00000411112 103 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AC091390.1-201ENST00000433904 331 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AC083863.1-201ENST00000438811 231 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 RPL37P4-201ENST00000448908 268 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AL513124.1-201ENST00000450410 614 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 LINC01399-202ENST00000458450 244 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AP003733.2-201ENST00000529409 171 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 PARP1P2-201ENST00000556806 195 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AC091167.4-201ENST00000605079 184 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AL138880.2-201ENST00000616214 239 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AC241585.2-209ENST00000638217 143 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 AC073073.2-201ENST00000609827 2578 ntBASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
BRPF3Q9ULD4 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 SRP72P2-201ENST00000344851 1979 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 RNU6-942P-201ENST00000363002 107 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 RN7SKP280-201ENST00000364196 304 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 Y_RNA.552-201ENST00000384665 112 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 RN7SL271P-201ENST00000487601 295 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 RNA5SP179-201ENST00000517284 121 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 AL442163.3-201ENST00000554110 156 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 AC020895.1-201ENST00000595362 272 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 MFSD8-236ENST00000641509 4050 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 ZNF826P-207ENST00000622273 1910 ntBASIC4.64□□□□□ -1.67
BRPF3Q9ULD4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 SPRR2C-201ENST00000290702 219 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 Y_RNA.14-201ENST00000362415 103 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 Y_RNA.105-201ENST00000363182 111 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RNU6-884P-201ENST00000363889 107 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RNA5SP283-201ENST00000365604 119 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RNU6-1026P-201ENST00000384465 108 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RPL21P75-201ENST00000396599 483 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RPL21P28-201ENST00000401418 483 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AL590556.1-201ENST00000423231 483 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AL691449.1-201ENST00000426570 421 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AC004975.1-201ENST00000428733 208 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AL117339.2-201ENST00000430475 180 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AL591043.1-201ENST00000432461 424 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RNA5SP310-201ENST00000459084 116 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RPL21P11-201ENST00000461458 483 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RPL21P39-201ENST00000463605 483 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AC087190.1-201ENST00000484462 480 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AC107032.1-201ENST00000485945 480 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AC132942.1-201ENST00000486753 483 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AC093591.1-201ENST00000491435 481 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RPL21P16-201ENST00000495531 483 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 SNORA31.1-201ENST00000515993 133 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 SNORA31.5-201ENST00000516190 133 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 RNU6-570P-201ENST00000517051 105 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AC012468.1-201ENST00000604888 430 ntBASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.63□□□□□ -1.67
BRPF3Q9ULD4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms