Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AL591043.1-201ENST00000432461 424 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 AC132479.1-201ENST00000449160 144 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 AC130509.1-201ENST00000464158 433 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 RPL30P6-201ENST00000475925 342 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 HMGB1P28-201ENST00000507778 552 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 RNU6-583P-201ENST00000516012 92 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 RNU6-1092P-201ENST00000516955 87 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 AL133153.1-201ENST00000557756 303 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 AC122134.1-202ENST00000569111 1201 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 AC108706.1-201ENST00000611053 297 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 MIR3529-201ENST00000637713 78 ntBASIC0.54□□□□□ -2.32
COMMD3Q9UBI1 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 RNU6-650P-201ENST00000365658 111 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 SNORA18.2-201ENST00000383865 132 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 MIR222-201ENST00000384992 110 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 SNORA40C-201ENST00000391285 128 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 Y_RNA.595-201ENST00000410403 105 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 DEFB130D-201ENST00000426866 237 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 HSPE1P9-201ENST00000440046 311 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 KATNBL1P3-201ENST00000443475 909 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AL078601.1-201ENST00000444542 271 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 RNU1-131P-201ENST00000458943 161 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 TOMM22P6-201ENST00000465035 409 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AC104563.1-201ENST00000476147 376 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 RPF2P2-201ENST00000504693 896 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 RNU6-322P-201ENST00000516010 103 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 RNU6-991P-201ENST00000516168 107 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AC136628.3-201ENST00000521868 290 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AP003484.1-201ENST00000530974 250 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 MTCO2P2-201ENST00000591258 225 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 VN1R83P-201ENST00000595685 445 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 BNIP3P30-201ENST00000601184 574 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AC084824.5-201ENST00000612009 413 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AC018926.1-201ENST00000616335 435 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 MIR6835-201ENST00000621552 64 ntBASIC0.53□□□□□ -2.32
COMMD3Q9UBI1 AL079343.1-201ENST00000572358 1771 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 SNORD114-27-201ENST00000363766 70 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 RNU6-622P-201ENST00000384272 103 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 RNU6-1122P-201ENST00000384449 107 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 RPL21P111-201ENST00000418453 477 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 EBAG9P1-201ENST00000418955 543 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 RPS15AP12-201ENST00000419498 388 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 SNX2P2-201ENST00000424553 323 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 CBX3P6-201ENST00000430257 527 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 MTND5P14-201ENST00000441481 1267 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 MTND1P31-201ENST00000449206 961 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 RPL18AP17-201ENST00000455326 198 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 RNU6-333P-201ENST00000459117 107 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 HMGN2P9-201ENST00000476875 229 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 HMGN1P7-201ENST00000491722 313 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AC134050.1-201ENST00000495088 933 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AC108729.3-201ENST00000513484 108 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 RNU6-1102P-201ENST00000516149 96 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 SNORA31.19-201ENST00000517079 126 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AL356057.1-201ENST00000533798 831 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 MIR4769-201ENST00000584126 77 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AL590095.2-201ENST00000604136 117 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AC112220.2-201ENST00000605513 533 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AC123767.1-202ENST00000620407 817 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 MIR1248-201ENST00000629190 106 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 AL133216.2-202ENST00000634512 349 ntBASIC0.52□□□□□ -2.33
COMMD3Q9UBI1 Y_RNA.40-201ENST00000362645 93 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 SNORD114-6-201ENST00000364393 72 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 MIR19B1-201ENST00000384829 87 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 AC004941.2-201ENST00000427009 228 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 MTCO1P3-201ENST00000429327 192 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 AC005094.1-201ENST00000440420 368 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 CALM1P1-201ENST00000442082 433 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 ELOCP30-201ENST00000447108 299 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 AC026414.1-201ENST00000504046 698 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 TRMT112P2-201ENST00000512910 132 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 RN7SKP88-201ENST00000516847 250 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 AP000907.2-201ENST00000530827 353 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms