Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC009878.1-201ENST00000621819 340 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AC092881.1-201ENST00000638218 2733 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 OR4G2P-201ENST00000328113 903 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 RNU6-655P-201ENST00000362858 107 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 RNU6-1274P-201ENST00000384557 107 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 MIR578-201ENST00000384828 96 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 MIR558-201ENST00000384920 94 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 SUMO2P12-201ENST00000405924 140 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 RNU2-23P-201ENST00000410545 195 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 RNU2-39P-201ENST00000410604 198 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 MED13P1-201ENST00000428342 171 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 snoU13.14-201ENST00000459372 104 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 RN7SL274P-201ENST00000492268 272 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 DUXAP5-201ENST00000529668 529 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 AP000763.2-201ENST00000540641 163 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 ANP32BP3-201ENST00000559213 706 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 AC009977.1-201ENST00000586015 570 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 AC004223.4-201ENST00000612426 332 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 MIR7844-201ENST00000616161 122 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 AL354685.2-201ENST00000448218 1447 ntBASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KLHL28Q9NXS3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 FARSBP1-201ENST00000435808 1778 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 SNORD115-3-201ENST00000363100 82 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 RNU6-384P-201ENST00000364900 104 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 SNORA24.1-201ENST00000384401 135 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 RNU6-1179P-201ENST00000384667 107 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 RNU6-482P-201ENST00000391068 107 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 RNA5SP212-201ENST00000391223 107 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC019129.1-201ENST00000403786 261 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 RNA5SP390-201ENST00000410191 113 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 SNORD56-201ENST00000413522 71 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 ELOCP4-201ENST00000420090 333 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AL365400.1-201ENST00000431854 640 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC117522.1-201ENST00000509821 380 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 RNU6-759P-201ENST00000516740 103 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 RNU6-295P-201ENST00000516901 104 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 Y_RNA.717-201ENST00000517106 92 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 LRRC34P1-201ENST00000542742 915 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC008015.1-201ENST00000555505 465 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 CLIC4P2-201ENST00000601934 717 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 SEPT7P9-203ENST00000604116 343 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 Z99289.3-201ENST00000605586 594 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC012360.2-201ENST00000609349 391 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC027807.2-201ENST00000616099 408 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AL359314.1-201ENST00000616913 261 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AL353997.5-201ENST00000618886 171 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 AC090517.3-201ENST00000625170 141 ntBASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KLHL28Q9NXS3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.13
KLHL28Q9NXS3 RNU6-1210P-201ENST00000363775 107 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 CBX3P9-201ENST00000402326 552 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 RNU2-2P-201ENST00000410396 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 RNU2-32P-201ENST00000411193 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC074117.2-201ENST00000417130 397 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 MTND2P29-201ENST00000438595 412 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC006026.2-201ENST00000457376 180 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 RNA5SP57-201ENST00000459463 123 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC005178.1-201ENST00000508392 440 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 SNORA43.2-201ENST00000516652 128 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 RN7SKP256-201ENST00000517201 314 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AP003392.2-201ENST00000527269 208 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 HMGN1P30-201ENST00000589286 268 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 BNIP3P25-201ENST00000596023 559 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 AC011494.1-201ENST00000596454 237 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 WISP1-OT1-201ENST00000602893 642 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.15-201ENST00000611544 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.16-201ENST00000613119 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.12-201ENST00000613778 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.20-201ENST00000613956 192 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.9-201ENST00000615427 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.11-201ENST00000616345 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.2-201ENST00000616535 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.3-201ENST00000617785 191 ntBASIC1.77□□□□□ -2.13
KLHL28Q9NXS3 U2.19-201ENST00000618602 191 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms