Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MIR5692A1-201ENST00000580523 69 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 MIR4713-201ENST00000582691 75 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 HMGN1P30-201ENST00000589286 268 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC245884.10-201ENST00000597355 337 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC008751.2-201ENST00000597885 980 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC078795.2-201ENST00000602835 1252 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 SEPT7P9-203ENST00000604116 343 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 AC019226.2-201ENST00000625973 424 ntBASIC1.54□□□□□ -2.16
CLN6Q9NWW5 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.54□□□□□ -2.16
CLN6Q9NWW5 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLN6Q9NWW5 RNU6-743P-201ENST00000364151 106 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 RNU4-28P-201ENST00000364739 141 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 RNU5E-5P-201ENST00000365379 116 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
CLN6Q9NWW5 MIR597-201ENST00000384968 97 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 MIR9-3-201ENST00000385084 90 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 RN7SKP192-201ENST00000411291 327 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 POLHP1-201ENST00000411806 470 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 OR9R1P-201ENST00000412200 877 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 EEF1A1P40-201ENST00000412883 573 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 RPL21P90-201ENST00000415692 466 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AC003989.2-201ENST00000440224 169 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 FDX1P2-201ENST00000450769 375 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AL353752.1-201ENST00000454946 260 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CLN6Q9NWW5 RNA5SP182-201ENST00000516064 82 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 Y_RNA.672-201ENST00000516289 104 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.53□□□□□ -2.16
CLN6Q9NWW5 MTND2P32-201ENST00000521584 1038 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 EEF1A1P37-201ENST00000522748 715 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AP005435.4-201ENST00000529514 284 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 CBX3P4-201ENST00000538909 354 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AC018630.3-201ENST00000542637 96 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AC022254.1-201ENST00000567857 235 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AC008521.1-201ENST00000587471 187 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AC010928.2-201ENST00000588017 287 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 AC112191.3-201ENST00000604371 277 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 MIR7844-201ENST00000616161 122 ntBASIC1.53□□□□□ -2.16
CLN6Q9NWW5 RNU6-179P-201ENST00000363350 107 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 RNU6-61P-201ENST00000365528 109 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 RPL23AP32-201ENST00000395315 459 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 RNU2-8P-201ENST00000410727 190 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 RN7SKP284-201ENST00000411002 343 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AC087884.1-201ENST00000469738 328 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 RNU1-86P-201ENST00000516108 154 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 RNU1-107P-201ENST00000516617 154 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 GNAI2P1-201ENST00000541815 315 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AC110588.1-201ENST00000559699 137 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 BNIP3P39-201ENST00000601077 554 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AL022345.1-201ENST00000607292 135 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AC091834.1-201ENST00000614543 472 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 U1.36-201ENST00000620684 176 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 AC068787.1-201ENST00000623908 691 ntBASIC1.52□□□□□ -2.17
CLN6Q9NWW5 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.52□□□□□ -2.17
CLN6Q9NWW5 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLN6Q9NWW5 RNU1-58P-201ENST00000362413 163 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 Y_RNA.22-201ENST00000362492 102 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 RNU6-78P-201ENST00000362897 107 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 RNU5E-7P-201ENST00000365290 117 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 Y_RNA.597-201ENST00000410463 100 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 RNU6-387P-201ENST00000411331 105 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 BTF3L4P1-201ENST00000413813 468 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AL590556.1-201ENST00000423231 483 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 UBE2V1P4-201ENST00000425374 344 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AL356583.2-201ENST00000426536 280 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.51□□□□□ -2.17
CLN6Q9NWW5 MTND2P33-201ENST00000506452 1031 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 MTCO3P9-201ENST00000506989 781 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.51□□□□□ -2.17
CLN6Q9NWW5 SNORA3.4-201ENST00000515969 96 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.51□□□□□ -2.17
CLN6Q9NWW5 MRPS36P3-201ENST00000519284 130 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AC022616.3-201ENST00000523940 148 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AC022878.1-201ENST00000530684 149 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLN6Q9NWW5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.51□□□□□ -2.17
CLN6Q9NWW5 RPL21P5-201ENST00000554662 472 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 HSBP1P1-201ENST00000555205 166 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AC091135.1-201ENST00000585943 307 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 CYP2C61P-201ENST00000604072 290 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AC087241.4-201ENST00000612441 480 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AL359740.1-201ENST00000624340 592 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 AC110994.2-201ENST00000635481 492 ntBASIC1.51□□□□□ -2.17
CLN6Q9NWW5 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms