Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL670379.9-201ENST00000605428 253 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 AL050343.2-201ENST00000607338 280 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VPS45Q9NRW7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.29□□□□□ -1.88
VPS45Q9NRW7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VPS45Q9NRW7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VPS45Q9NRW7 FAM35CP-201ENST00000554755 2470 ntBASIC3.29□□□□□ -1.88
VPS45Q9NRW7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC138915.1-201ENST00000565427 1685 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 RNU6-1011P-201ENST00000384668 107 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC023141.4-201ENST00000412031 328 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AL627311.1-201ENST00000431514 115 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 Y_RNA.632-201ENST00000459189 102 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 RN7SL863P-201ENST00000462370 296 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 RPS27P27-201ENST00000498779 255 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 RN7SKP24-201ENST00000515888 284 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 SNORA31.19-201ENST00000517079 126 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 HPRT1P3-201ENST00000539521 576 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC025423.5-201ENST00000550230 219 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC021739.1-201ENST00000559631 174 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC100830.2-201ENST00000581636 240 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC044792.1-201ENST00000593294 196 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 APOOP1-201ENST00000604695 592 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 MTND4LP5-201ENST00000605152 292 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC016727.1-205ENST00000605437 569 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.28□□□□□ -1.88
VPS45Q9NRW7 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 MIR3199-2-201ENST00000636243 86 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 AC008264.2-201ENST00000610193 3731 ntBASIC3.28□□□□□ -1.88
VPS45Q9NRW7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.28□□□□□ -1.89
VPS45Q9NRW7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 SNORD3E-201ENST00000362899 217 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 RNU6-1297P-201ENST00000384415 104 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 RNU6-658P-201ENST00000384606 106 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 Y_RNA.623-201ENST00000411128 95 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 SAR1AP4-201ENST00000429225 591 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 RPS3AP52-201ENST00000435639 297 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 FABP5P14-201ENST00000437273 393 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AL583843.1-201ENST00000456070 346 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 RAC1P5-201ENST00000512182 576 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 RNU6-559P-201ENST00000516151 98 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 RNU1-143P-201ENST00000516296 146 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AC026371.1-201ENST00000551867 419 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 RNU6-85P-201ENST00000605989 107 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 U1.23-201ENST00000610293 146 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 RNU1-68P-201ENST00000615382 146 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 U1.39-201ENST00000621562 146 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 AL160413.1-201ENST00000622780 310 ntBASIC3.27□□□□□ -1.89
VPS45Q9NRW7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
VPS45Q9NRW7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AC138393.1-203ENST00000327086 343 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 MIR449A-201ENST00000362113 91 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 SNORD14B-201ENST00000364533 90 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 RNU6-384P-201ENST00000364900 104 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 RNU6-166P-201ENST00000384371 107 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 RPL21P3-201ENST00000395517 478 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AL592148.1-201ENST00000413568 445 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AC007560.1-201ENST00000426912 237 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 NIPA2P5-201ENST00000452282 464 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 SNORD19B-201ENST00000459623 84 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AC146507.2-201ENST00000460608 476 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 RPS29P20-201ENST00000489592 171 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 RNA5SP217-201ENST00000515959 91 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 RNU6-572P-201ENST00000516724 80 ntBASIC3.26□□□□□ -1.89
VPS45Q9NRW7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.26□□□□□ -1.89
VPS45Q9NRW7 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms