Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 ZNF658B-202ENST00000615961 3375 ntBASIC2.97□□□□□ -1.93
DDX4Q9NQI0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.96□□□□□ -1.93
DDX4Q9NQI0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 Y_RNA.86-201ENST00000363020 111 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 Y_RNA.160-201ENST00000363677 92 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 SNORA75B-201ENST00000384053 137 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 RNA5SP219-201ENST00000390940 113 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 EIF4E2P1-201ENST00000393781 255 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC138393.2-201ENST00000414742 246 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 RPL21P111-201ENST00000418453 477 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AL353729.1-201ENST00000425044 720 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC007560.1-201ENST00000426912 237 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 TOMM20P4-201ENST00000427861 435 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 MTATP6P23-201ENST00000440153 476 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AL353572.1-201ENST00000442490 417 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 MTCO2P3-201ENST00000442543 421 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 TRBVA-201ENST00000498804 316 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC069113.1-201ENST00000517763 267 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC134698.4-201ENST00000523451 826 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 VN1R80P-201ENST00000597126 338 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC107871.2-201ENST00000612894 502 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AL031601.2-202ENST00000622650 282 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AL008636.1-201ENST00000625038 1018 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC100810.6-201ENST00000638068 285 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC008264.2-201ENST00000610193 3731 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 AC007336.1-201ENST00000576365 3828 ntBASIC2.96□□□□□ -1.94
DDX4Q9NQI0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AC131280.1-202ENST00000624067 4211 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 Y_RNA.390-201ENST00000383932 102 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 RNU6-166P-201ENST00000384371 107 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 RNU6-658P-201ENST00000384606 106 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AL359511.1-201ENST00000402970 211 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AL162578.1-201ENST00000406202 378 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 RNU4-53P-201ENST00000410828 140 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 Z98742.3-201ENST00000418637 326 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 SKA2P1-201ENST00000425592 390 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AC244505.4-201ENST00000434905 287 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AL121890.1-201ENST00000435457 205 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 SSXP5-201ENST00000443473 287 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AL583843.1-201ENST00000456070 346 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 RNU7-23P-201ENST00000459465 62 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AC011005.2-201ENST00000487324 359 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 RN7SL636P-201ENST00000497504 294 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 MTND3P25-201ENST00000509243 135 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 SNORA20.3-201ENST00000516880 132 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AC093913.1-201ENST00000614178 329 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 AC090617.10-201ENST00000624308 134 ntBASIC2.95□□□□□ -1.94
DDX4Q9NQI0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.95□□□□□ -1.94
DDX4Q9NQI0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AL161431.1-201ENST00000618966 4205 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 SNORD14B-201ENST00000364533 90 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 Y_RNA.615-201ENST00000410769 117 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 MTND4P18-201ENST00000447010 465 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AC114786.4-201ENST00000508771 728 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 SNORA19.2-201ENST00000516013 114 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 SNORA14.1-201ENST00000516113 141 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 RNU6-1038P-201ENST00000516516 104 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 RNU6-1314P-201ENST00000517139 104 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AC023050.3-201ENST00000541142 333 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AL121579.1-201ENST00000555129 305 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 PSMA3P-201ENST00000555485 635 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AC103810.1-201ENST00000579873 453 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AC011712.1-201ENST00000588959 234 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 BNIP3P25-201ENST00000596023 559 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 MIR6715A-201ENST00000615929 79 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 UCA1.1-201ENST00000620952 75 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AC069528.2-201ENST00000624849 1991 ntBASIC2.94□□□□□ -1.94
DDX4Q9NQI0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
DDX4Q9NQI0 AC110491.1-201ENST00000562191 2010 ntBASIC2.93□□□□□ -1.94
DDX4Q9NQI0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.93□□□□□ -1.94
DDX4Q9NQI0 SNORD113-7-201ENST00000363762 77 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms