Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
GCM1Q9NP62 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
GCM1Q9NP62 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
GCM1Q9NP62 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.67□□□□□ -1.82
GCM1Q9NP62 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
GCM1Q9NP62 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
GCM1Q9NP62 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.67□□□□□ -1.82
GCM1Q9NP62 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GCM1Q9NP62 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
GCM1Q9NP62 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC126755.2-208ENST00000327792 462 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC138969.1-213ENST00000331436 462 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 Y_RNA.319-201ENST00000365138 92 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 MIR329-1-201ENST00000385028 80 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 RN7SKP167-201ENST00000411047 285 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 RNU6-1001P-201ENST00000411265 100 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC009237.7-201ENST00000447357 229 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 RPL23AP3-201ENST00000453844 468 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 RNA5SP291-201ENST00000517222 105 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 MIR3690-201ENST00000580266 75 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC005176.2-201ENST00000596933 147 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC024153.1-201ENST00000603103 365 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC114781.5-201ENST00000615297 108 ntBASIC3.66□□□□□ -1.82
GCM1Q9NP62 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.66□□□□□ -1.82
GCM1Q9NP62 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
GCM1Q9NP62 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
GCM1Q9NP62 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
GCM1Q9NP62 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
GCM1Q9NP62 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
GCM1Q9NP62 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
GCM1Q9NP62 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 RNU6-50P-201ENST00000362356 103 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 Y_RNA.357-201ENST00000365487 109 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 RNU6-211P-201ENST00000384047 107 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 SNORA29-201ENST00000384183 140 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GCM1Q9NP62 HLFP1-201ENST00000402375 499 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 MIR1290-201ENST00000408735 78 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 MIR1911-201ENST00000410783 80 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GCM1Q9NP62 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 AC005840.1-201ENST00000498412 377 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 HMGB3P3-201ENST00000510526 400 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 SNORA43.2-201ENST00000516652 128 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 RNU6-1198P-201ENST00000516904 67 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 TRAV8-5-201ENST00000537369 341 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 AC016256.1-201ENST00000547971 354 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 AC107016.1-201ENST00000550463 337 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 AL590392.1-201ENST00000604960 446 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 AL138721.1-201ENST00000616756 179 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 MIR6758-201ENST00000620653 63 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.65□□□□□ -1.83
GCM1Q9NP62 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GCM1Q9NP62 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
GCM1Q9NP62 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
GCM1Q9NP62 ZNF204P-201ENST00000416749 2397 ntBASIC3.65□□□□□ -1.83
GCM1Q9NP62 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
GCM1Q9NP62 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GCM1Q9NP62 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.64□□□□□ -1.83
GCM1Q9NP62 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
GCM1Q9NP62 Y_RNA.7-201ENST00000362352 102 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 Y_RNA.23-201ENST00000362496 106 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNU1-132P-201ENST00000364300 164 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNU6-215P-201ENST00000365169 102 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNA5SP366-201ENST00000365454 123 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 SNORA62-201ENST00000365493 153 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNU6-741P-201ENST00000383889 107 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNU6-142P-201ENST00000384019 107 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNU6-213P-201ENST00000384051 104 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 MIR186-201ENST00000384988 86 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNU6-159P-201ENST00000391080 106 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 U3.37-201ENST00000408528 213 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNA5SP129-201ENST00000410276 118 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNU6-1245P-201ENST00000411130 106 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 AL157831.1-201ENST00000426134 473 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.64□□□□□ -1.83
GCM1Q9NP62 AC005042.3-201ENST00000453230 174 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RPS23P7-201ENST00000466210 444 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 AC109327.1-201ENST00000471666 403 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RN7SL860P-201ENST00000473738 223 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 KC877373.1-201ENST00000479066 408 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.64□□□□□ -1.83
GCM1Q9NP62 AL132838.2-201ENST00000492041 314 ntBASIC3.64□□□□□ -1.83
GCM1Q9NP62 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms