Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AP000763.2-201ENST00000540641 163 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC005046.1-201ENST00000608515 625 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC096772.1-201ENST00000609146 564 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC064836.2-201ENST00000609491 462 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC006504.8-201ENST00000621046 635 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 AC100810.6-201ENST00000638068 285 ntBASIC2.52□□□□□ -2.01
CHMP1AQ9HD42 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 Y_RNA.40-201ENST00000362645 93 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 RNU6-1252P-201ENST00000363054 104 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 SNORA7.4-201ENST00000384249 137 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 MIR450B-201ENST00000401182 78 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 U6atac.2-201ENST00000408644 118 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 RNU4-47P-201ENST00000410876 114 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 RNU6-293P-201ENST00000411259 106 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 AC138623.1-201ENST00000418060 216 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 RPL30P16-201ENST00000419341 429 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 EIF4EP4-201ENST00000424916 578 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 AL513185.2-201ENST00000425543 193 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 AC007547.1-201ENST00000462177 490 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 AC097462.2-201ENST00000504623 481 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 RPPH1-2P-201ENST00000516688 293 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 AC010186.2-204ENST00000537668 439 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 MIR3670-2-201ENST00000582974 65 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 MIR3616-201ENST00000584070 92 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 MIR3670-1-201ENST00000584160 65 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 MIR3670-3-201ENST00000584855 65 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 ELOCP5-201ENST00000604924 333 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 MIR3670-4-201ENST00000612260 65 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 AC007318.2-201ENST00000620999 243 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 MIR622-201ENST00000638396 96 ntBASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
CHMP1AQ9HD42 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 Y_RNA.126-201ENST00000363382 111 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 Y_RNA.157-201ENST00000363638 102 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 RNU6-1329P-201ENST00000365664 107 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 RNU6-692P-201ENST00000384496 107 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 Y_RNA.530-201ENST00000384587 101 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AL162578.1-201ENST00000406202 378 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC008267.5-201ENST00000424928 265 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC022018.1-201ENST00000430685 241 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 RPS29P6-201ENST00000438196 145 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AL359672.1-201ENST00000442302 409 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 RPL30P12-201ENST00000474666 353 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC008628.2-201ENST00000502605 298 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AK3P2-201ENST00000507976 429 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC092436.3-201ENST00000511788 257 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 RNA5SP367-201ENST00000516557 118 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 RNU6-358P-201ENST00000516564 75 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 RNU6-1332P-201ENST00000516666 104 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 SNORA31.18-201ENST00000517043 134 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 RNU6-1314P-201ENST00000517139 104 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC104576.1-201ENST00000524225 88 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 PSMA3P-201ENST00000555485 635 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 MIR5680-201ENST00000577577 84 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC105245.1-201ENST00000581934 244 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC069294.1-201ENST00000608397 350 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC034229.5-201ENST00000624258 185 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 AC241585.2-209ENST00000638217 143 ntBASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.5□□□□□ -2.01
CHMP1AQ9HD42 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 Y_RNA.100-201ENST00000363141 102 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 RNU1-140P-201ENST00000365040 165 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 RNU1-138P-201ENST00000384093 164 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 MIR544A-201ENST00000384855 91 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 MIR186-201ENST00000384988 86 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 RNU2-23P-201ENST00000410545 195 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 MTND1P2-201ENST00000430604 821 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 MTCO2P3-201ENST00000442543 421 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AC080013.2-201ENST00000460866 323 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AP000852.1-201ENST00000472460 573 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AC109329.1-201ENST00000518744 317 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AF235103.2-201ENST00000525753 346 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AC107016.2-201ENST00000547968 190 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 BNIP3P16-201ENST00000589779 534 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 VN1R107P-201ENST00000601784 209 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 SRGNP1-201ENST00000603392 451 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AL049779.4-201ENST00000604500 156 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AC104237.2-201ENST00000612456 443 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms