Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 CYB5AP5-201ENST00000549779 389 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AC092354.1-201ENST00000606057 376 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AC073349.3-201ENST00000617616 186 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AC018926.3-201ENST00000618841 406 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AC123767.1-202ENST00000620407 817 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
CHD8Q9HCK8 MIR302D-201ENST00000362275 68 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 HMGN2P39-201ENST00000398005 273 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AL355615.1-201ENST00000406187 641 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AC092634.6-201ENST00000418558 192 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 DDX3P2-201ENST00000446138 111 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 MRPS17P3-201ENST00000465453 385 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.18□□□□□ -2.38
CHD8Q9HCK8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.18□□□□□ -2.38
CHD8Q9HCK8 RNU6-1256P-201ENST00000516539 103 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 RNA5SP137-201ENST00000516833 135 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 AP005229.2-201ENST00000609980 697 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.18□□□□□ -2.38
CHD8Q9HCK8 MIR605-201ENST00000385078 83 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 Y_RNA.616-201ENST00000410835 95 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 ZNF92P1Y-201ENST00000415010 1191 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 snoU13.9-201ENST00000458927 103 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 PSMC1P5-201ENST00000512850 177 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AP003034.1-201ENST00000534621 422 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC0.17□□□□□ -2.38
CHD8Q9HCK8 ADAM3B-201ENST00000569937 840 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AC026271.5-201ENST00000577873 130 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 U4atac.1-201ENST00000618345 95 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AC009033.1-201ENST00000624279 431 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 MTND4P14-201ENST00000435799 1354 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 SNORD33-201ENST00000362761 85 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 SNORD18A-201ENST00000363753 72 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 Y_RNA.498-201ENST00000384460 102 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 MIR95-201ENST00000385072 81 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 RNU6-910P-201ENST00000390844 107 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.17□□□□□ -2.38
CHD8Q9HCK8 PIGFP2-201ENST00000421400 651 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.17□□□□□ -2.38
CHD8Q9HCK8 LARP1BP2-201ENST00000486594 519 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AC136628.3-201ENST00000521868 290 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AC104417.1-201ENST00000523974 751 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 COPS8P3-201ENST00000526024 482 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.17□□□□□ -2.38
CHD8Q9HCK8 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.17□□□□□ -2.38
CHD8Q9HCK8 AC005021.1-201ENST00000608730 355 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 MIR5739-201ENST00000619803 80 ntBASIC0.17□□□□□ -2.38
CHD8Q9HCK8 MIR587-201ENST00000384845 96 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 MIR561-201ENST00000385216 97 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 RNA5SP501-201ENST00000410990 112 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AL589872.1-201ENST00000426602 288 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 RPL31P3-201ENST00000458430 332 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AC112771.1-201ENST00000463581 102 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 SCARNA8-201ENST00000515924 131 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 FARSBP1-201ENST00000435808 1778 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 RNU6-486P-201ENST00000363116 107 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 MIR1283-2-201ENST00000408621 87 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 RPL21P111-201ENST00000418453 477 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 C1DP1-201ENST00000426049 402 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AC113420.1-201ENST00000507903 571 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AC074344.1-201ENST00000512823 224 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 HSPA8P13-201ENST00000523715 472 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AL590705.4-201ENST00000532209 134 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AL157871.3-201ENST00000557231 293 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 MIR4441-201ENST00000582623 100 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AL022345.1-201ENST00000607292 135 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AC091304.9-201ENST00000612091 226 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 AL359314.1-201ENST00000616913 261 ntBASIC0.16□□□□□ -2.38
CHD8Q9HCK8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.16□□□□□ -2.38
CHD8Q9HCK8 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.15□□□□□ -2.38
CHD8Q9HCK8 MIR514A1-201ENST00000385133 98 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.15□□□□□ -2.38
CHD8Q9HCK8 RNA5SP404-201ENST00000517118 132 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 NRON-201ENST00000517270 370 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 AP003392.2-201ENST00000527269 208 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 MRPS36P4-201ENST00000534436 298 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 AC016256.1-201ENST00000547971 354 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.15□□□□□ -2.38
CHD8Q9HCK8 BNIP3P27-201ENST00000599991 412 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 MTCYBP22-201ENST00000603788 447 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 RAC1P9-201ENST00000604990 392 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 AL022345.2-201ENST00000606307 135 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 AL365434.2-201ENST00000607979 234 ntBASIC0.15□□□□□ -2.38
CHD8Q9HCK8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.15□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms