Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AL669831.1-202ENST00000428504 417 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC073464.1-201ENST00000429823 534 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AL121890.1-201ENST00000435457 205 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC004383.1-201ENST00000438135 289 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 GTF2IP13-201ENST00000438487 386 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 MTAPP1-201ENST00000489154 819 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 RNU1-86P-201ENST00000516108 154 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 RNU1-107P-201ENST00000516617 154 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 RN7SKP219-201ENST00000516825 296 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AL121821.2-201ENST00000556081 394 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 MIR4703-201ENST00000577728 79 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC073539.2-201ENST00000597113 165 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AL138889.2-201ENST00000603883 242 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC064807.4-201ENST00000607201 407 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AP001596.2-201ENST00000608410 312 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC007684.1-201ENST00000609671 477 ntBASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.28□□□□□ -2.04
RNF41Q9H4P4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 Y_RNA.1-201ENST00000352915 104 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 MIR412-201ENST00000362142 91 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 SNORD14B-201ENST00000364533 90 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 RNU6-116P-201ENST00000384042 109 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 CIR1P3-201ENST00000405137 479 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 RNU2-3P-201ENST00000410144 191 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 UBE2V1P10-201ENST00000414685 269 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 MTCO3P41-201ENST00000414801 328 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 RPL21P90-201ENST00000415692 466 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC016831.2-201ENST00000417179 352 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AL353621.1-201ENST00000418219 243 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC002486.1-201ENST00000435098 391 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 OSTCP8-201ENST00000445117 448 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC092001.1-201ENST00000453012 261 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 snoU13.26-201ENST00000459452 105 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC006512.1-201ENST00000468816 291 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC090096.1-201ENST00000489168 390 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC116655.1-201ENST00000508324 901 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC105417.1-201ENST00000514691 285 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 RNU5F-8P-201ENST00000515941 111 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 RNA5SP182-201ENST00000516064 82 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 SCARNA11.3-201ENST00000517276 130 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC092325.1-201ENST00000566449 554 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 MTATP6P3-201ENST00000581686 676 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 MIR3117-201ENST00000584034 78 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AL136363.2-201ENST00000604173 851 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC087045.1-201ENST00000605856 382 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC116312.1-201ENST00000606841 314 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.27□□□□□ -2.05
RNF41Q9H4P4 U6.114-201ENST00000636407 96 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 MIR7515-201ENST00000637837 67 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 ADAM3A-203ENST00000461344 2157 ntBASIC2.27□□□□□ -2.05
RNF41Q9H4P4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.26□□□□□ -2.05
RNF41Q9H4P4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RNF41Q9H4P4 MTND4P1-201ENST00000457501 1466 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNU6-1287P-201ENST00000362914 107 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNU6-942P-201ENST00000363002 107 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 Y_RNA.296-201ENST00000364930 108 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNU6-1060P-201ENST00000384664 107 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 SNORD116-4-201ENST00000384733 96 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNU6-443P-201ENST00000384780 107 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNU6-903P-201ENST00000391270 109 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNU6-1140P-201ENST00000410517 106 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNA5SP111-201ENST00000411386 101 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 CYCSP33-201ENST00000414485 327 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 MORF4L1P6-201ENST00000418771 268 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 EIF1AXP1-201ENST00000419267 435 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 AL627311.1-201ENST00000431514 115 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 AL445687.1-201ENST00000439946 251 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.26□□□□□ -2.05
RNF41Q9H4P4 AC233279.1-201ENST00000455300 423 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 TPTE2P5-203ENST00000458118 728 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 YWHAEP4-201ENST00000505390 198 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 MTND3P25-201ENST00000509243 135 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RNA5SP503-201ENST00000517047 117 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 AC135279.1-201ENST00000543493 504 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.26□□□□□ -2.05
RNF41Q9H4P4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.26□□□□□ -2.05
RNF41Q9H4P4 RPS3AP23-202ENST00000574601 686 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 MIR5694-201ENST00000581190 76 ntBASIC2.26□□□□□ -2.05
RNF41Q9H4P4 MIR4298-201ENST00000584380 73 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms