Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDT1Q9H211 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.05□□□□□ -1.92
CDT1Q9H211 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDT1Q9H211 AC092593.1-201ENST00000515413 1815 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CDT1Q9H211 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDT1Q9H211 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.05□□□□□ -1.92
CDT1Q9H211 CD24P4-201ENST00000382840 243 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AL590004.1-201ENST00000405321 300 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AC099548.1-201ENST00000421443 426 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.05□□□□□ -1.92
CDT1Q9H211 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.05□□□□□ -1.92
CDT1Q9H211 NDUFA5P4-201ENST00000436704 385 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.05□□□□□ -1.92
CDT1Q9H211 AP004217.1-201ENST00000480579 346 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.05□□□□□ -1.92
CDT1Q9H211 AC008716.1-201ENST00000511084 513 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 RN7SKP24-201ENST00000515888 284 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 RNU6-1213P-201ENST00000517075 94 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.05□□□□□ -1.92
CDT1Q9H211 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.05□□□□□ -1.92
CDT1Q9H211 AP005639.2-201ENST00000527592 928 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.05□□□□□ -1.92
CDT1Q9H211 AL121821.2-201ENST00000556081 394 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.05□□□□□ -1.92
CDT1Q9H211 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.05□□□□□ -1.92
CDT1Q9H211 MIR3171-201ENST00000584270 74 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 MIR5692C1-201ENST00000585309 91 ntBASIC3.05□□□□□ -1.92
CDT1Q9H211 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.05□□□□□ -1.92
CDT1Q9H211 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.04□□□□□ -1.92
CDT1Q9H211 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDT1Q9H211 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.04□□□□□ -1.92
CDT1Q9H211 Y_RNA.31-201ENST00000362574 102 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 SNORA63-201ENST00000363450 132 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 SNORA5B-201ENST00000363786 132 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 RNU6-884P-201ENST00000363889 107 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 Y_RNA.212-201ENST00000364177 102 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDT1Q9H211 RNU6-1027P-201ENST00000383998 107 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 Y_RNA.473-201ENST00000384333 102 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CDT1Q9H211 MIR450B-201ENST00000401182 78 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 AL451074.5-201ENST00000415894 435 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.04□□□□□ -1.92
CDT1Q9H211 RPL32P28-201ENST00000443577 397 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.04□□□□□ -1.92
CDT1Q9H211 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.04□□□□□ -1.92
CDT1Q9H211 snoU13.28-201ENST00000459235 104 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDT1Q9H211 RNU1-86P-201ENST00000516108 154 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 RNU1-107P-201ENST00000516617 154 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 SNORA31.19-201ENST00000517079 126 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 ELOCP31-201ENST00000540463 467 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.04□□□□□ -1.92
CDT1Q9H211 HMGB1P14-201ENST00000557424 591 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.04□□□□□ -1.92
CDT1Q9H211 AC138761.3-201ENST00000579993 334 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 AL022345.1-201ENST00000607292 135 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 AC090115.4-201ENST00000609970 188 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 AL138726.1-201ENST00000614873 333 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.04□□□□□ -1.92
CDT1Q9H211 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.04□□□□□ -1.92
CDT1Q9H211 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDT1Q9H211 MAPK10-322ENST00000641485 4530 ntBASIC3.04□□□□□ -1.92
CDT1Q9H211 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDT1Q9H211 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.04□□□□□ -1.92
CDT1Q9H211 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.04□□□□□ -1.92
CDT1Q9H211 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDT1Q9H211 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDT1Q9H211 AC233263.6-201ENST00000631132 1963 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.03□□□□□ -1.92
CDT1Q9H211 RNU6-799P-201ENST00000363567 107 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 SNORD113-7-201ENST00000363762 77 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 RNU1-112P-201ENST00000364401 164 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 SNORD116-11-201ENST00000383882 92 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 Y_RNA.431-201ENST00000384086 102 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 RNU6-692P-201ENST00000384496 107 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 RNA5SP252-201ENST00000391131 119 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 SNORA40C-201ENST00000391285 128 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 EIF4E2P1-201ENST00000393781 255 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AL138827.1-201ENST00000402666 306 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 RN7SKP158-201ENST00000410453 326 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 RNU6-607P-201ENST00000411283 108 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AL353621.1-201ENST00000418219 243 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 NCOR1P3-201ENST00000420479 303 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 MTND2P23-201ENST00000422990 651 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AL590632.1-201ENST00000424289 371 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AC007560.1-201ENST00000426912 237 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 FABP5P14-201ENST00000437273 393 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.03□□□□□ -1.92
CDT1Q9H211 BRK1P2-201ENST00000442875 223 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AL583843.1-201ENST00000456070 346 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AL031183.1-201ENST00000457667 207 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AC003982.1-202ENST00000469928 248 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AP002884.2-201ENST00000471647 395 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.03□□□□□ -1.92
CDT1Q9H211 RNU6-1069P-201ENST00000516612 133 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms