Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AC022616.6-201ENST00000520479 119 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AP003034.1-201ENST00000534621 422 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 MIR3683-201ENST00000580847 82 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 MIR4672-201ENST00000583126 81 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 MIR548AC-201ENST00000585049 88 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AC013244.3-201ENST00000605614 388 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AC025754.2-201ENST00000606491 432 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 AC097478.2-201ENST00000610572 514 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 MIR8074-201ENST00000615081 81 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 OR4G3P-201ENST00000633500 913 ntBASIC1.05□□□□□ -2.24
NKX6-2Q9C056 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.05□□□□□ -2.24
NKX6-2Q9C056 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 RNY4P24-201ENST00000362735 96 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 Y_RNA.67-201ENST00000362870 100 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 RNU4-92P-201ENST00000363783 136 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 RNU6-960P-201ENST00000364056 120 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 RNU6-809P-201ENST00000384461 107 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 Y_RNA.510-201ENST00000384511 114 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 RNA5SP390-201ENST00000410191 113 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC006366.1-201ENST00000422002 759 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 MTCYBP5-201ENST00000423752 1135 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 EXOSC3P1-201ENST00000448649 500 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AL590365.1-201ENST00000450788 243 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC130509.1-201ENST00000464158 433 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC132942.1-201ENST00000486753 483 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 RPL30P1-201ENST00000488676 339 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC116347.2-201ENST00000514912 523 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 MIR3169-201ENST00000578032 83 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC121334.2-201ENST00000605387 271 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC144521.1-201ENST00000607148 956 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AL359547.2-201ENST00000615810 418 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 U6.42-201ENST00000618440 107 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC007792.1-201ENST00000623023 402 ntBASIC1.04□□□□□ -2.24
NKX6-2Q9C056 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
NKX6-2Q9C056 AC002543.1-201ENST00000299783 1954 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 U8.2-201ENST00000363156 134 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 RNU6-384P-201ENST00000364900 104 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 RNU6-636P-201ENST00000384598 107 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 MIR578-201ENST00000384828 96 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 MIR1323-201ENST00000408090 73 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 MTND2P4-201ENST00000445034 1004 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 NDUFB1P2-201ENST00000449477 176 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC134050.1-201ENST00000495088 933 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC025465.3-201ENST00000510570 311 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 RNU6-123P-201ENST00000516163 102 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 RNU7-51P-201ENST00000516560 62 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 BNIP3P6-201ENST00000549284 499 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC002400.1-201ENST00000569310 726 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC137800.2-201ENST00000574375 120 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC091135.1-201ENST00000585943 307 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 BNIP3P40-201ENST00000596017 556 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AL157392.4-201ENST00000609756 345 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC009318.2-201ENST00000610917 651 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 MIR8081-201ENST00000611533 95 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AL159153.1-201ENST00000619688 317 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 AC120349.3-201ENST00000624377 529 ntBASIC1.03□□□□□ -2.24
NKX6-2Q9C056 SNORD114-1-201ENST00000362705 72 ntBASIC1.02□□□□□ -2.25
NKX6-2Q9C056 Y_RNA.97-201ENST00000363094 102 ntBASIC1.02□□□□□ -2.25
NKX6-2Q9C056 SNORD114-6-201ENST00000364393 72 ntBASIC1.02□□□□□ -2.25
NKX6-2Q9C056 Y_RNA.302-201ENST00000364997 102 ntBASIC1.02□□□□□ -2.25
NKX6-2Q9C056 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.02□□□□□ -2.25
NKX6-2Q9C056 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
NKX6-2Q9C056 MIR504-201ENST00000385065 83 ntBASIC1.02□□□□□ -2.25
NKX6-2Q9C056 U8.13-201ENST00000390842 128 ntBASIC1.02□□□□□ -2.25
NKX6-2Q9C056 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.02□□□□□ -2.25
NKX6-2Q9C056 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.02□□□□□ -2.25
NKX6-2Q9C056 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.02□□□□□ -2.25
NKX6-2Q9C056 AL590556.1-201ENST00000423231 483 ntBASIC1.02□□□□□ -2.25
NKX6-2Q9C056 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.02□□□□□ -2.25
NKX6-2Q9C056 ZNF72P-201ENST00000425869 1908 ntBASIC1.02□□□□□ -2.25
NKX6-2Q9C056 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms