Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 AC093788.1-201ENST00000609356 927 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 AC078880.5-201ENST00000617845 421 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TRIM4Q9C037 AC009269.6-201ENST00000621778 588 ntBASIC1.09□□□□□ -2.23
TRIM4Q9C037 TEX21P-201ENST00000447107 1476 ntBASIC1.09□□□□□ -2.24
TRIM4Q9C037 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRIM4Q9C037 RNA5SP62-201ENST00000363457 110 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 SNORA25.8-201ENST00000364831 128 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 MIR186-201ENST00000384988 86 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.08□□□□□ -2.24
TRIM4Q9C037 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.08□□□□□ -2.24
TRIM4Q9C037 AC138623.1-201ENST00000418060 216 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 USP9YP35-201ENST00000435696 412 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 AL096829.2-201ENST00000446582 742 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 AL353718.1-201ENST00000451028 517 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 AC108059.3-201ENST00000456388 214 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.08□□□□□ -2.24
TRIM4Q9C037 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.08□□□□□ -2.24
TRIM4Q9C037 RPF2P2-201ENST00000504693 896 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 RNY4P37-201ENST00000516225 96 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 AC022616.8-201ENST00000533569 253 ntBASIC1.08□□□□□ -2.24
TRIM4Q9C037 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.08□□□□□ -2.24
TRIM4Q9C037 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.08□□□□□ -2.24
TRIM4Q9C037 MTND5P9-201ENST00000503854 1755 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRIM4Q9C037 RNU6-288P-201ENST00000363690 104 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 RNU6-271P-201ENST00000363858 105 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.07□□□□□ -2.24
TRIM4Q9C037 CR769776.1-201ENST00000441254 787 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 DYNLT3P2-201ENST00000442517 295 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.07□□□□□ -2.24
TRIM4Q9C037 Y_RNA.681-201ENST00000516445 113 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 SNORA31.17-201ENST00000516953 127 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 RNU6-902P-201ENST00000517212 91 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.07□□□□□ -2.24
TRIM4Q9C037 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.07□□□□□ -2.24
TRIM4Q9C037 AC019288.1-201ENST00000557918 224 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 AC002400.1-201ENST00000569310 726 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 MTATP6P25-201ENST00000574491 261 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 VN1R87P-201ENST00000596706 487 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 AL590095.2-201ENST00000604136 117 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 AC090970.3-201ENST00000612566 866 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 AC023158.2-201ENST00000614876 543 ntBASIC1.07□□□□□ -2.24
TRIM4Q9C037 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TRIM4Q9C037 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TRIM4Q9C037 RNA5SP457-201ENST00000363657 124 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 MRPS36P1-201ENST00000421291 307 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 JTBP1-201ENST00000441314 247 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 AC010409.1-201ENST00000487382 476 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 AC025465.3-201ENST00000510570 311 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 RNA5SP476-201ENST00000516613 103 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 RNA5SP337-201ENST00000517007 109 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 AC109329.1-201ENST00000518744 317 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 AC104417.1-201ENST00000523974 751 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.06□□□□□ -2.24
TRIM4Q9C037 7SK.7-201ENST00000603504 247 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 AL133445.2-201ENST00000611191 527 ntBASIC1.06□□□□□ -2.24
TRIM4Q9C037 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
TRIM4Q9C037 RNU6-1010P-201ENST00000362757 107 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 RNU6-944P-201ENST00000364023 107 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 RNU6-609P-201ENST00000365459 107 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 Y_RNA.433-201ENST00000384089 102 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 OR6C66P-201ENST00000414917 930 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.05□□□□□ -2.24
TRIM4Q9C037 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM4Q9C037 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC005094.1-201ENST00000440420 368 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM4Q9C037 RPL39P28-201ENST00000465655 155 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM4Q9C037 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC024589.1-201ENST00000512207 263 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 RNU6-965P-201ENST00000516721 96 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 SNORA31.19-201ENST00000517079 126 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC021451.1-201ENST00000523498 1129 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC005668.1-201ENST00000571142 476 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 MIR3912-201ENST00000577566 105 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC126365.2-201ENST00000580630 379 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC012065.4-201ENST00000602445 679 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 uc_338.15-201ENST00000615470 191 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AP000676.3-201ENST00000623299 569 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC093875.1-201ENST00000623688 504 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC112204.3-201ENST00000623822 332 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC008133.2-201ENST00000624540 351 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 AC092125.1-201ENST00000562568 1995 ntBASIC1.05□□□□□ -2.24
TRIM4Q9C037 FARSBP1-201ENST00000435808 1778 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms