Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 AC006157.1-201ENST00000611750 366 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.58□□□□□ -1.84
SALL3Q9BXA9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.58□□□□□ -1.84
SALL3Q9BXA9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC118273.1-201ENST00000525324 3006 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC233263.6-201ENST00000631132 1963 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 RNU6-702P-201ENST00000364982 107 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.428-201ENST00000384078 102 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.455-201ENST00000384230 98 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.556-201ENST00000384677 113 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AL590632.1-201ENST00000424289 371 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC096644.2-201ENST00000429278 159 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 RPL12P25-201ENST00000455592 494 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC087884.1-201ENST00000469738 328 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 RNU6-699P-201ENST00000517081 110 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 SNORD116.3-201ENST00000517176 78 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 ERHP1-201ENST00000523006 310 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 MIR5692A1-201ENST00000580523 69 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC011494.1-201ENST00000596454 237 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC012119.1-201ENST00000603184 222 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AL161423.1-201ENST00000613700 262 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC008264.2-201ENST00000610193 3731 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AC092435.3-201ENST00000565538 3654 ntBASIC3.57□□□□□ -1.84
SALL3Q9BXA9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 MIR422A-201ENST00000362286 90 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.307-201ENST00000365022 117 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 RNU6-1318P-201ENST00000365389 103 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 RNU6-76P-201ENST00000384060 104 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 AL139039.1-201ENST00000401900 692 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 AL451074.5-201ENST00000415894 435 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 RNU7-138P-201ENST00000459479 64 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.661-201ENST00000516003 99 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 AC009812.2-201ENST00000517657 457 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 BDH2P1-201ENST00000602288 736 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.56□□□□□ -1.84
SALL3Q9BXA9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SALL3Q9BXA9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.496-201ENST00000384444 101 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.510-201ENST00000384511 114 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.527-201ENST00000384573 102 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 RPS4XP7-201ENST00000406274 780 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AC092809.3-201ENST00000415453 231 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 MTATP8P1-201ENST00000467115 207 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 RPL27AP5-201ENST00000469428 449 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AC092436.3-201ENST00000511788 257 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 RNA5SP341-201ENST00000516261 117 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 SNORA31.22-201ENST00000517204 135 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AC069113.1-201ENST00000517763 267 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AC104695.3-201ENST00000604052 296 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
SALL3Q9BXA9 AC005592.1-201ENST00000566527 1640 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 MTND5P6-201ENST00000422338 1798 ntBASIC3.55□□□□□ -1.84
SALL3Q9BXA9 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SALL3Q9BXA9 SNORA9.2-201ENST00000365361 133 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 RNU6-596P-201ENST00000365395 98 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 SNORA44-201ENST00000384584 132 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.574-201ENST00000384766 95 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 RNU6-882P-201ENST00000391025 103 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AL590004.2-201ENST00000404787 371 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 RNU6-847P-201ENST00000411115 108 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 CBX3P6-201ENST00000430257 527 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 USP9YP30-201ENST00000430729 455 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AC099799.1-201ENST00000439809 192 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.54□□□□□ -1.84
SALL3Q9BXA9 S100A11P2-201ENST00000467589 312 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 RN7SL330P-201ENST00000469709 307 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 RN7SL429P-201ENST00000479090 223 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 RN7SL489P-201ENST00000486185 223 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms