Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR6867-201ENST00000610636 67 ntBASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 AC005296.1-201ENST00000616145 209 ntBASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 AC099506.2-201ENST00000623074 221 ntBASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 AC091895.1-201ENST00000624494 256 ntBASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSBP3Q9BWW4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AC007390.2-201ENST00000606229 3803 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AL359693.1-201ENST00000614959 2407 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AL079305.1-201ENST00000623159 3008 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 LINC02471-203ENST00000641941 4752 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AC004925.1-201ENST00000624256 2706 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 RNU6-105P-201ENST00000363909 104 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.230-201ENST00000364348 109 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.262-201ENST00000364641 102 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 RNU6-20P-201ENST00000384106 107 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.441-201ENST00000384123 112 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.497-201ENST00000384447 98 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.570-201ENST00000384750 101 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 MIR1290-201ENST00000408735 78 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 RNU6-735P-201ENST00000410612 107 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 RNU2-68P-201ENST00000410878 191 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP39-201ENST00000411245 120 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AL451050.1-201ENST00000450126 415 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 SNORD2.1-201ENST00000458762 69 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP165-201ENST00000517142 115 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP196-201ENST00000625967 102 ntBASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSBP3Q9BWW4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AC135776.4-201ENST00000624300 1904 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 MIR372-201ENST00000362225 67 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP361-201ENST00000362686 118 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 Y_RNA.136-201ENST00000363444 102 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP515-201ENST00000364570 118 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 RNU6-1175P-201ENST00000365200 107 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP235-201ENST00000365411 114 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 SNORD116-18-201ENST00000383961 92 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 RNU6-72P-201ENST00000384285 79 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 PPIAP31-201ENST00000405422 495 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 RNA5SP44-201ENST00000410446 133 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 HSPE1P12-201ENST00000412576 301 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AC098614.2-201ENST00000426040 255 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AC024067.1-201ENST00000426199 223 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AL117339.2-201ENST00000430475 180 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AC006011.1-201ENST00000442758 349 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AC096638.1-201ENST00000444678 216 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AC074133.1-201ENST00000515696 183 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 RPL21P9-201ENST00000556149 474 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 MIR4308-201ENST00000580634 81 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 MIR4286-201ENST00000580651 93 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 AC241585.2-209ENST00000638217 143 ntBASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.41□□□□□ -1.86
SSBP3Q9BWW4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSBP3Q9BWW4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSBP3Q9BWW4 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSBP3Q9BWW4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSBP3Q9BWW4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSBP3Q9BWW4 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SSBP3Q9BWW4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.4□□□□□ -1.86
SSBP3Q9BWW4 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 Y_RNA.331-201ENST00000365267 102 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 RNA5SP283-201ENST00000365604 119 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 RNU6-142P-201ENST00000384019 107 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms