Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AL136360.1-201ENST00000503377 1900 ntBASIC1.97□□□□□ -2.09
CHRDL1Q9BU40 AP006437.1-201ENST00000641440 3685 ntBASIC1.97□□□□□ -2.09
CHRDL1Q9BU40 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
CHRDL1Q9BU40 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 ZNF680P1-201ENST00000436625 1469 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 OR4G2P-201ENST00000328113 903 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 RNU6-858P-201ENST00000362436 107 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 Y_RNA.409-201ENST00000383990 98 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 RNU6-259P-201ENST00000383999 107 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 SNORA75B-201ENST00000384053 137 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 RNU6-1029P-201ENST00000384109 107 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 MIR34A-201ENST00000385130 110 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 MIR454-201ENST00000390180 115 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 MTATP6P18-201ENST00000417994 673 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AL353193.1-201ENST00000421444 268 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC000111.3-201ENST00000433478 193 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 RPS3P1-201ENST00000456781 192 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC079382.1-201ENST00000493346 557 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC091133.4-201ENST00000511142 308 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 RPL23AP94-201ENST00000512518 302 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC010493.1-201ENST00000513479 292 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 SNORA4.4-201ENST00000515921 135 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 SNORD27.1-201ENST00000516319 72 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AP003072.2-201ENST00000527756 676 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC022880.1-201ENST00000534017 973 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AL136363.2-201ENST00000604173 851 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC011155.2-201ENST00000623202 216 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 AC007336.1-201ENST00000576365 3828 ntBASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHRDL1Q9BU40 Y_RNA.1-201ENST00000352915 104 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC062016.1-201ENST00000355719 319 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 Y_RNA.41-201ENST00000362646 102 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 RNU6-1287P-201ENST00000362914 107 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 SNORA25B-201ENST00000365507 128 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 RNU6-1060P-201ENST00000384664 107 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 MIR578-201ENST00000384828 96 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 SNORA46.1-201ENST00000391069 153 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 HMGN2P39-201ENST00000398005 273 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AL162578.1-201ENST00000406202 378 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 RNA5SP184-201ENST00000411071 108 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 MTCO3P41-201ENST00000414801 328 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC138623.1-201ENST00000418060 216 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC063976.3-201ENST00000426849 329 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 MTCO2P19-201ENST00000427513 598 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC012308.1-201ENST00000451232 178 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AL583843.1-201ENST00000456070 346 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 RNU7-182P-201ENST00000459009 62 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC107222.1-201ENST00000510899 637 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 RNA5SP503-201ENST00000517047 117 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC107953.1-201ENST00000522216 297 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC245505.1-201ENST00000556398 224 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC136619.2-201ENST00000563361 631 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 MIR4287-201ENST00000579398 78 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 MIR4775-201ENST00000581168 75 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC008752.3-201ENST00000588113 712 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AL031274.2-201ENST00000599419 203 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC078795.2-201ENST00000602835 1252 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC080078.2-201ENST00000603766 501 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC022306.2-201ENST00000617563 647 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AL158209.2-201ENST00000619266 216 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC092608.2-201ENST00000624427 218 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 MIR6863-201ENST00000636112 90 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 MIR3529-201ENST00000637713 78 ntBASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CHRDL1Q9BU40 AC005336.3-201ENST00000623833 2679 ntBASIC1.94□□□□□ -2.1
CHRDL1Q9BU40 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHRDL1Q9BU40 AL359851.1-201ENST00000569460 4997 ntBASIC1.94□□□□□ -2.1
CHRDL1Q9BU40 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHRDL1Q9BU40 RNU6-1159P-201ENST00000362933 107 ntBASIC1.94□□□□□ -2.1
CHRDL1Q9BU40 RNU6-623P-201ENST00000363143 105 ntBASIC1.94□□□□□ -2.1
CHRDL1Q9BU40 SNORD114-30-201ENST00000364448 72 ntBASIC1.94□□□□□ -2.1
CHRDL1Q9BU40 RNU4-48P-201ENST00000365559 182 ntBASIC1.94□□□□□ -2.1
CHRDL1Q9BU40 RNU1-57P-201ENST00000384491 166 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms