Protein–RNA interactions for Protein: Q9BQQ7

RTP3, Receptor-transporting protein 3, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP3Q9BQQ7 RPL21P2-201ENST00000440049 481 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 RNU2-69P-201ENST00000516061 100 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 RNU6-572P-201ENST00000516724 80 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 SNORA31.19-201ENST00000517079 126 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 AC118273.2-201ENST00000532092 465 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 BNIP3P6-201ENST00000549284 499 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 MIR5692A1-201ENST00000580523 69 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 AC006504.8-201ENST00000621046 635 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 AC009033.1-201ENST00000624279 431 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 AC110079.1-202ENST00000635213 138 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 AC100810.6-201ENST00000638068 285 ntBASIC2.71□□□□□ -1.98
RTP3Q9BQQ7 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 SNORD3E-201ENST00000362899 217 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 SNORD21-201ENST00000383953 95 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RNU6-1179P-201ENST00000384667 107 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 MIR514A2-201ENST00000385131 88 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 MIR514A3-201ENST00000385132 88 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AL356776.1-201ENST00000406574 447 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RPL26P27-201ENST00000414397 437 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC098614.2-201ENST00000426040 255 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AL356320.1-201ENST00000429616 163 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 ERLEC1P1-201ENST00000433806 578 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 MTATP6P7-201ENST00000453315 681 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RPL26P9-201ENST00000457466 433 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RNU7-23P-201ENST00000459465 62 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RPL21P93-201ENST00000480465 489 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RN7SL297P-201ENST00000483161 293 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RPS27AP10-201ENST00000496103 208 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC091885.1-201ENST00000506658 268 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 MTND3P25-201ENST00000509243 135 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC008716.1-201ENST00000511084 513 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC025465.4-201ENST00000513422 638 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RN7SKP24-201ENST00000515888 284 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 RNU6-548P-201ENST00000517083 115 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC078814.3-201ENST00000553036 491 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AL121579.1-201ENST00000555129 305 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AL118558.2-201ENST00000556294 238 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 HMGN2P15-201ENST00000585707 270 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AC010620.2-201ENST00000600135 313 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AL355598.1-201ENST00000604169 202 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 U4.3-201ENST00000621047 82 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 AP003400.5-201ENST00000624827 617 ntBASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RTP3Q9BQQ7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.160-201ENST00000363677 92 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.373-201ENST00000365600 103 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.378-201ENST00000365652 113 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 RNU6-166P-201ENST00000384371 107 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 RNU6-434P-201ENST00000384376 107 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 RNU6-658P-201ENST00000384606 106 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 RNA5SP210-201ENST00000391034 120 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AL592114.1-201ENST00000403842 483 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 RN7SKP223-201ENST00000410582 62 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 NDUFS5P4-201ENST00000412983 318 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AL353621.1-201ENST00000418219 243 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 DPH3P2-201ENST00000422618 250 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AL353729.1-201ENST00000425044 720 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AC007560.1-201ENST00000426912 237 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AL583843.1-201ENST00000456070 346 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 Y_RNA.673-201ENST00000516306 88 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 RNU6-56P-201ENST00000516986 93 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 CENPUP1-201ENST00000526649 1202 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 MTCO3P23-201ENST00000561363 289 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 AC023043.3-201ENST00000593113 385 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 U6.42-201ENST00000618440 107 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 U6.99-201ENST00000637524 83 ntBASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.69□□□□□ -1.98
RTP3Q9BQQ7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms